Gene Franean1_7245 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_7245 
Symbol 
ID5675546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp8847736 
End bp8848674 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content73% 
IMG OID641246082 
ProductMOSC domain-containing protein 
Protein accessionYP_001511470 
Protein GI158318962 
COG category[R] General function prediction only 
COG ID[COG3217] Uncharacterized Fe-S protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.373711 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.311801 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCCA GCAGCGAGGC GGGCACGACC GCGAGCCCCG CCGTGGGCCG CGTCGTCCGG 
CTCTTCCGGT ACCCGTTGAA GGGGATGACA CCCGAGGCGC TCCCGGAGGT GCCGCTCCAT
CCGGGCGACA GCGTCCCCGG TGACCGCATG TTCGCGCTCG CCCGCCCGGA CACGATGTTC
GACGAGGAAG ACCCCGAGGT CCTGCCCAAG ACCCGTTTCG TCATGCTCCA GAAGGACGAG
GCGCTCGCGC GGATCCGCAG CTCGTTCGAC CCGGCGTCCG GGATGCTGAC CTTCGGCCTG
CGCGAGCAGG CGGCACACAC CGGTGACGTG CCTGGTGACG GGCCCGTCAC CGGGCCCGGT
GGCGGCCCCG CCGCCAGGCC CGGTGACGGG CTCGTCGACG TGCGCCGGGT CGACCTGAAC
ACCCCGGCCG GGCGCACCGA GTTGGAGGAC TACGTCCTCG CGGTGCTCGG GCCCCGGCTC
GGCGGCCGGC CGCGGCTCGT CGCTGCCCGC GGGCGGCACC GCTTCACCGA CACGGGTGCT
GGCGGGGACA CGTTCATGCA CGCCGTCTCG GTGATCAATC TCGCCTCCGT CCGGGATCTC
GCGGAGCGGG TCGGTGAGCC CGTCGACCCG CTGCGGTTCC GGGCGAACGT CTACATCGAC
GGGATCGCAC CGTGGGCGGA GCTCGGCTGG GCCGGCCTGG AGCTCGGCCT CGGCGCCGCC
CGCGCGCGCG TGCTCGCACG GACGCCACGC TGCGCGGCGA CGACCGTCAA TCCCGAGACG
GGGATCCGTG ACATCCGGAT ACTCAAGGAA CTCTCCAGCA ACTACGGGCA TACCGACTGC
GGGGTCTACG TCACCATGCT GACCGAGGCG ATCCTGCGCC CGGGCGACCC GCTCACGCCG
CCGGACGGAC GCGAGGAGGA TGTGCTGTGC GGGTCGTGA
 
Protein sequence
MDASSEAGTT ASPAVGRVVR LFRYPLKGMT PEALPEVPLH PGDSVPGDRM FALARPDTMF 
DEEDPEVLPK TRFVMLQKDE ALARIRSSFD PASGMLTFGL REQAAHTGDV PGDGPVTGPG
GGPAARPGDG LVDVRRVDLN TPAGRTELED YVLAVLGPRL GGRPRLVAAR GRHRFTDTGA
GGDTFMHAVS VINLASVRDL AERVGEPVDP LRFRANVYID GIAPWAELGW AGLELGLGAA
RARVLARTPR CAATTVNPET GIRDIRILKE LSSNYGHTDC GVYVTMLTEA ILRPGDPLTP
PDGREEDVLC GS