| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_7199 |
|---|
| Symbol | |
|---|
| ID | 5675500 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 8791676 |
|---|
| End bp | 8792512 |
|---|
| Gene Length | 837 bp |
|---|
| Protein Length | 278 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641246036 |
|---|
| Product | methyltransferase type 11 |
|---|
| Protein accession | YP_001511424 |
|---|
| Protein GI | 158318916 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.375023 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACTGATC ACGGTGAAGG CGGCCAGAAC GCCTATGTGC TGACCCTCGA TCCGAGTGAG
CTGGCTCGCT ACCAGTTCAT GGCGGCGGTG GCGAAACAGG ACGAGTCCGC CGAATGGACC
GCGGCCGGGA TCGTCCCCGG CGCGCGGGTC GCGGACGTCG GCTGCGGACC GGCCGCGCTC
GCCCTCGCCC TGGCCGCCGT GGTCGGACCG ACCGGGAAGG TCGACGCCGT GGACCGGGAC
CCCGACGCGC GGGCGCTGGC CGGGCAGGTC GTCGCGGCCG GGAAGGCCGA CAACATCTCG
ATCACCGAGG GCTCCGCGGA TGCCAGCGGA CTCCCGGCCG CCAGCTACGA CACGGTGATG
ATGCGCCATG TCCTCGCCCA CAACGGTGGT CGCGAGCAGG CGATCGTCGA CCACCTCGCG
ACGCTGGTGA AGCCCGGCGG CTGGGTGTAC CTCCTCGACA TCGACGCGTC GGCGCTCCGG
GTCGTCGGCG GCCCGCCGAC GGTCACCGAC ATCGTCGAGC TCGGTGAGCG GTACCACCGT
TTCCACGCGA CCCTCGGCAA TGACCTGTCC GTCGGGCTGC GGCTCGGCGC TCTGCTGCGC
TCGGCCGGGC TCGTCGACGT CCACCACCGG GGCTGGTACA ACGTCAACGA GCTGCCACCG
GGGATGCGGC CACCGTCCTG GGCCGCTGTA CCGGCGATGA CGGCCGCCGG ACACGCCGAC
AGCGACGATG TCGAACGCTG GGAGAGGGCG TTCGCCGAAC TGGACGCCGC CACCGACCGC
CCGACCTATT TCGTCCCGGT GTTCTCGGCC CGCGCCCGCC GACCGGTCGG CGGGTAG
|
|---|
| Protein sequence | MTDHGEGGQN AYVLTLDPSE LARYQFMAAV AKQDESAEWT AAGIVPGARV ADVGCGPAAL
ALALAAVVGP TGKVDAVDRD PDARALAGQV VAAGKADNIS ITEGSADASG LPAASYDTVM
MRHVLAHNGG REQAIVDHLA TLVKPGGWVY LLDIDASALR VVGGPPTVTD IVELGERYHR
FHATLGNDLS VGLRLGALLR SAGLVDVHHR GWYNVNELPP GMRPPSWAAV PAMTAAGHAD
SDDVERWERA FAELDAATDR PTYFVPVFSA RARRPVGG
|
|---|
| |