| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_7171 |
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| Symbol | |
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| ID | 5675472 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 8752408 |
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| End bp | 8752638 |
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| Gene Length | 231 bp |
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| Protein Length | 76 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641246008 |
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| Product | LuxR family transcriptional regulator |
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| Protein accession | YP_001511396 |
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| Protein GI | 158318888 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.710202 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.194337 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACACCGG TGCTCGCCGT GGTGGCCCGG GCGGTCGCCC GGGGCCTGTC GAACCAGGAG
ATCGCCGGCG AGTTGTTCCT GTCGCCGCAC ACCGTGCGGG ACCATCTCAA GGCGGTCTTC
GCCAAGGTCG GCGTCGGCAG CCGCGGTGAG CTCGTCGCGA AGCTGTTCGC CGAGCACTAC
GGACCAGCCC TGTACGACCC GACAGCCACC GTCACGCACG TGCAGTACTG A
|
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| Protein sequence | MTPVLAVVAR AVARGLSNQE IAGELFLSPH TVRDHLKAVF AKVGVGSRGE LVAKLFAEHY
GPALYDPTAT VTHVQY
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