| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_7163 |
|---|
| Symbol | |
|---|
| ID | 5675464 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 8744427 |
|---|
| End bp | 8745242 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641246000 |
|---|
| Product | methyltransferase type 12 |
|---|
| Protein accession | YP_001511388 |
|---|
| Protein GI | 158318880 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0716695 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.210733 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGCGGG CGAACGAGGC GAACTGGGAC GCCCGCACCC CGGTGCACGT GGCGAGCGCG
TTCTACGGCC TCGACGGTAG CAGGAAACCA TTCGACTGGT TTGCGCCGTT CGAATGGGAG
GACCTCGGCG ACCTGGCGGG CCGGGACGTC GTCCATCTGC AGTGTCATCT CGGCACGGAA
ACCATTGCGT TCGCACGCCG AGGCGCCCGC GCGGTGGGAC TGGATTTTTC CGGAGAATCC
GTCGCACGGG CGCGGGAGAT CGCGTCGCGG GCCGGCGCCG ACCTACGGTA CGTGCGGTCT
GACGTATACG ACGCGGCGGG CGTGCTGGGC CAAGGTTGTT TCGATGTCGT CTACACCGGC
AAGGGTGCGC TGTGTTATCT ACCCGATCTG CCCCGGTGGG CCGCCGAGGT CGCGTGTCTG
CTGCGTCCCG GTGGCCGGCT ATATCTGGTG GAGTTTCATC CGCTGTTCAA TGCGCTGGGT
CCCAAGCCCC CGCCGGGCGT CGGCGAGGAA CTGCTGCTGC GCCATGACTA CCTGGCGGGC
CGGGGCCCGA TCGAGCGCGA CGCGACCTAC ACATACACCG ACGGCCCCGC GCTGGGGAGC
GCGACGGTCG CCTATGAATG GACGCACGGT CTCGGCGAGG TGATCGACGC GCTGGTCGGG
GCGGACCTGA CCGTGACCGG GCTGAGGGAG ACCGACGCGC TGCCGTGGCC ACGGTGGAAA
CGTATGGTCC GCGGGGAGGA CGGCTGGTGG CGGCTACCGG AGACGGATCC ACGTGTGCCG
CTGCTGTACG CACTGAAGGC CATCAGGAAG GCGTGA
|
|---|
| Protein sequence | MMRANEANWD ARTPVHVASA FYGLDGSRKP FDWFAPFEWE DLGDLAGRDV VHLQCHLGTE
TIAFARRGAR AVGLDFSGES VARAREIASR AGADLRYVRS DVYDAAGVLG QGCFDVVYTG
KGALCYLPDL PRWAAEVACL LRPGGRLYLV EFHPLFNALG PKPPPGVGEE LLLRHDYLAG
RGPIERDATY TYTDGPALGS ATVAYEWTHG LGEVIDALVG ADLTVTGLRE TDALPWPRWK
RMVRGEDGWW RLPETDPRVP LLYALKAIRK A
|
|---|
| |