| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_7076 |
|---|
| Symbol | |
|---|
| ID | 5675386 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 8635126 |
|---|
| End bp | 8636391 |
|---|
| Gene Length | 1266 bp |
|---|
| Protein Length | 421 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641245921 |
|---|
| Product | PucR family transcriptional regulator |
|---|
| Protein accession | YP_001511312 |
|---|
| Protein GI | 158318804 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2508] Regulator of polyketide synthase expression |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTGGGAA GCCGCACAAG GGGCGCGAGA CCGTCGACCT CGGCCACTGA ACCCGCTGCC
ACCGCTGCAT CCCCTGCTTC GGCGACGCAG TTGCTCGCCG TCGAGTGTCT AGCCGGCCTG
GAAGCGCTGA CCGACGAGCT GGTTGGCGCC GTCCACGCGG GCGACCGTCC CTGGATCGCC
GCCTACGACA CGGTGTCGGT GGATGATCTG CGTCGGGGCT GCGGCGCCTA CCTGCGGCGA
GTCCTCGAAC GGGTCGCGGG CGAGGTCTCG GACGTAACAG ACGACGAGGT GGCGGTGGGC
ATCGGCCGCG CCCGGGCTGA GCAGGGCGTC CCGCTGGAGG TGATGTTGCG GACCTTCCGG
CTGGGCGGGC GCGTCGTGTG GGAGGCCTTG CTGCGTGCGG CCCGGCGTAC CGGGGCGAGC
TCGGAGATCA TTGGCCCAGC GGCGACCGTG CTGTGGACCG TCGTCGACAG CATGTCCTCG
TCGCTGTCCA CGGCGTACCG GCAGATGCAG CTCGACCAGC TGCACCGGGC CGAGCGACGG
CGCCACGCGG TGCTCGAGGA CCTCCTGGCC GGGCGTGCAG ACGACGCGGC ATTCCTGCAG
CGCGCAGCCG GCGAGCTCGA CCTGCCCGTC GGTGGGCGGT ACCTGGTCGT GGTTGCCGCC
CTGTCCGATC AGCGGTCGCC GGCCCCGGCT GGGCGCGCGC AGATAGTGCT GGACGCTCAC
CGCATCCGGT CGATTTGGCA CGAACGGGCC GACACGGTCG TCGGGGTTGT CCCGCTTCCC
AAGACGTCGT CCTTCTCGCG TTTGTCGTCC GATGCGGGCG CAGCGCTTGG CGGGCGTGCG
GCCGCCGCAC ACGTCAACGG CGGCCTGGCC GCCGTTGCTC TGGGCCACCG GCTCGCCACC
TTGGCGCTGA GCACGGTGCC CATCAACGCG TCGGGCCTTG TGAGCATCGA TGAACGTGTC
CCAGAATCCC TTCTCGTCCG CTCGCCGGAG CTGTGCCGCC GGCTCGTCGA CACCTGGCTC
GGCCCGGTGC TCACCCTGCC TGTTAAGGAA TCCAAGCCCC TTCTGGACAC CCTCACCGCC
TGGCTCGAGG CCGACCGGTC AGCCTCGGCG GCCGCCGAGC GGCTCTTCTG TCACCGCAAC
ACCGTGCTGA ACCGGTTGCA CCGCGTCGCC GTACTCACCG GACGGAGCCT CGACGGCCGG
CGGCCCTTCG TCGAGCTGTC GCTCGCGCTG AGCGCCCTGG AGCTTCCCGA GCCACCCGCT
TCCTGA
|
|---|
| Protein sequence | MLGSRTRGAR PSTSATEPAA TAASPASATQ LLAVECLAGL EALTDELVGA VHAGDRPWIA
AYDTVSVDDL RRGCGAYLRR VLERVAGEVS DVTDDEVAVG IGRARAEQGV PLEVMLRTFR
LGGRVVWEAL LRAARRTGAS SEIIGPAATV LWTVVDSMSS SLSTAYRQMQ LDQLHRAERR
RHAVLEDLLA GRADDAAFLQ RAAGELDLPV GGRYLVVVAA LSDQRSPAPA GRAQIVLDAH
RIRSIWHERA DTVVGVVPLP KTSSFSRLSS DAGAALGGRA AAAHVNGGLA AVALGHRLAT
LALSTVPINA SGLVSIDERV PESLLVRSPE LCRRLVDTWL GPVLTLPVKE SKPLLDTLTA
WLEADRSASA AAERLFCHRN TVLNRLHRVA VLTGRSLDGR RPFVELSLAL SALELPEPPA
S
|
|---|
| |