| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_7034 |
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| Symbol | |
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| ID | 5675345 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 8583805 |
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| End bp | 8585850 |
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| Gene Length | 2046 bp |
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| Protein Length | 681 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641245880 |
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| Product | levanase |
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| Protein accession | YP_001511271 |
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| Protein GI | 158318763 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1621] Beta-fructosidases (levanase/invertase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00232409 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTTAC GCATCAGACG AAGCGCGGGA AACAAGCATT CCGTGGTCAG GCGCCCCGTT
ACTCTGACGG CGGTTCTGAC GGCGGCCACG GCGGCAGCCA GCATATTATT AGGCCTGCCG
GCGCCCACTC CGGCGTCGGC AGTCGGTCCG AGTTACCGGG ACACCTACCA CTTCACCGTG
CCCGACCACT GGAAGAACGA CCCGCAACGT CCGGTGTACG TGAACGGCAA GTTCTATTAC
TACTACCTCT ACAACGCCGA TTACGACGCC AACCCGACGG CCAACTACGG CACCGAGTGG
CGGCTCGCGA CCAGCTACGA CGGCGTCGTG TTCGCCGATC AGGGGGTTGC GGCACCGAAG
AAGACGAACG CCAACTATGA TCTGTGGTCG GGCTCAACGG TGGTCGACAC CGCCAATACA
GCCGGGTTCG GCGCAGGCGC CGTCGTGATG CTCGTGACCC AGATGGACCA TCCGACCGAG
GCGCAGAAGC TCAACGCATC CGGTCCGCAG GCCCAGTTCC TCTGGTATTC AACGAACGGC
GGCCGCAACT TCACACCGTA CGGCGAGGCG CCGGTCATCG CGAACGGCGG TCGGGCTGAC
TTCCGGGATC CGAAGGTCCT GTGGGATGCT GACCGCAACC GCTGGGTCGC GCTCATCGCC
GAAGGCCAGA AGATCGGTTT CTACACCTCG GCCAACCTCA AGGACTGGAC CCGGGTCTCC
GAGTACACCA ACAGCGGCCT CGGTATTCTG GAGTGCCCCG ACCTGTTCAA GATGCGTGCC
GATGACGGCA CCACCCACTG GGTAATGGGC ATGAGCGCAA ACGGTTACCT CACCGGCGCA
CCCAGCACGT ACGCCTACTG GACAGGAAGT TTCGACGGCA CGACATTCAC ACCCGACACG
GCGGAGCCGC AGTGGGCCGA CCACGGATTC GACTGGTACG GTGCGGTCAC CTGGGAGGAC
CCGACGGCAC CACTCGACAA GCGCTACGCG ATCGGATGGA TGAACAACTG GTCGTACCCG
CACTCGACGC CGACGTGGCC GAACGACGGC TTCAATGGAA CCGACTCGAT CACCCGCCAA
CTGGCACTGA AGAAATACGG ATCGACATAC AGCCTAACAT CCCAGCCAGT TGCTGCACTG
AACAATATTG CGACACAGAC AACGAACCTC GGTACGTTCT CGGTGAACGG CACCGTGCCG
CTCGCCTACA GTGGTACCTC GTACCAGCTC GAGACGACGG TGACCTGGAG CACTGCACAG
AACATCGGTC TTGGGCTGCG CAGGTCGAAC GACGGTACCC GCCACGCCGA CGTGGGCGTG
CACGACACGT ACAGTTATCT TAACCGAGGT GGTACCACAA ATCCGGACAC TTCTGGACAG
AAGCTTGAAA GTCGCGCTCC GTTCGACATG AGCGCCCAAA CCGTGCACCT GCGTATCCTC
GTCGACCGCA CCACGATCGA AGTGTTTGTC GACGACGGGC GCTTCGTGCA CTCGAGCCAG
GTCTTCCCCG ACCCCGCCGA TGCCGGCATC GCCCTGTACT CGCTCGGTGG GACAGCGACC
TTCTCCAACG TCACGATCAC CGAATTCGGT AGCGTCGTCC AGAGGCCAGC ACGACTGATC
GCGGACTTCG AGGGCTCGAC CTGGGGCAAC GGATGGACCG CGACGGGCTC CTTCGCCTCC
GCCGCGCCGA CCGTGGCATC GCTGCCCGGA CAGGTTGGCG CCAAGGTCGC CGACACCTAC
GTCGGCGGCG GTGACCCGGC GACCGGCACG ATCACCTCCC CGCCGTTCAC CATCGATCGC
AACCATCTCC ACTTCTCCAT AGCGGGCGGC AACCATCCCC TTGGCGCGGA ACCGGCCACG
TCCGTCCAAC TGCTCGTCGG CGGACAACCT GTCCTCACGT CAACCGGGGA TAATTCGAGT
ACCCTGCGAC ATGTCGAATG GGATGTTACT GCCTATGCCG GACAGGCCGC ACAATTCCAG
ATCCTTGACG ACGCGACTGG AACTTGGGGA CACCTCGTGG TCGACCAGGT CGTACTGAGC
GACTGA
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| Protein sequence | MNLRIRRSAG NKHSVVRRPV TLTAVLTAAT AAASILLGLP APTPASAVGP SYRDTYHFTV
PDHWKNDPQR PVYVNGKFYY YYLYNADYDA NPTANYGTEW RLATSYDGVV FADQGVAAPK
KTNANYDLWS GSTVVDTANT AGFGAGAVVM LVTQMDHPTE AQKLNASGPQ AQFLWYSTNG
GRNFTPYGEA PVIANGGRAD FRDPKVLWDA DRNRWVALIA EGQKIGFYTS ANLKDWTRVS
EYTNSGLGIL ECPDLFKMRA DDGTTHWVMG MSANGYLTGA PSTYAYWTGS FDGTTFTPDT
AEPQWADHGF DWYGAVTWED PTAPLDKRYA IGWMNNWSYP HSTPTWPNDG FNGTDSITRQ
LALKKYGSTY SLTSQPVAAL NNIATQTTNL GTFSVNGTVP LAYSGTSYQL ETTVTWSTAQ
NIGLGLRRSN DGTRHADVGV HDTYSYLNRG GTTNPDTSGQ KLESRAPFDM SAQTVHLRIL
VDRTTIEVFV DDGRFVHSSQ VFPDPADAGI ALYSLGGTAT FSNVTITEFG SVVQRPARLI
ADFEGSTWGN GWTATGSFAS AAPTVASLPG QVGAKVADTY VGGGDPATGT ITSPPFTIDR
NHLHFSIAGG NHPLGAEPAT SVQLLVGGQP VLTSTGDNSS TLRHVEWDVT AYAGQAAQFQ
ILDDATGTWG HLVVDQVVLS D
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