Gene Franean1_7010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_7010 
Symbol 
ID5675321 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp8548284 
End bp8548712 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content72% 
IMG OID641245856 
ProductCopY family transcriptional regulator 
Protein accessionYP_001511247 
Protein GI158318739 
COG category[K] Transcription 
COG ID[COG3682] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.780011 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGGTC GAGCCCGCCC CCGCCCGAGC GGGGGCCTGG AGAGCGAGGT CGTCGCCTGC 
CTCGCCGCGG CCGACGGGCC GTTGACCGCG GCGCAGGTCC AGGCCGAACT GGGCGATGAC
CTGGCCTACA CGACTATCCT GACGACTCTG ACACGTCTGT ACGCCAAACA GGCCCTGACC
CGCACCCCCC GCGGCCGCGC CTACGCCTAC CAGCTGGTCG GCAACCTGCC CGAAACCCAG
GCCGGGCTCA CCGCGCGCCA GATGCAGAAG CTGCTCGACG CCGGCGTCGA TCGCGCCACG
GTGCTGTCCC GGTTCGTCGA CAGCCTGGAC GAGGACTCCG AACAGATCCT GCGGGACCTG
CTCGCCCGAC ACCCCGAGCC CGACGAGAAG CCGCCGGGAC CGGACACCCG GAACCGGAGA
CCGAGATGA
 
Protein sequence
MAGRARPRPS GGLESEVVAC LAAADGPLTA AQVQAELGDD LAYTTILTTL TRLYAKQALT 
RTPRGRAYAY QLVGNLPETQ AGLTARQMQK LLDAGVDRAT VLSRFVDSLD EDSEQILRDL
LARHPEPDEK PPGPDTRNRR PR