Gene Franean1_7009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_7009 
Symbol 
ID5675320 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp8547188 
End bp8548063 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content68% 
IMG OID641245855 
Productiron permease FTR1 
Protein accessionYP_001511246 
Protein GI158318738 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0672] High-affinity Fe2+/Pb2+ permease 
TIGRFAM ID[TIGR00145] FTR1 family protein 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.103758 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.35089 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTCGCCA ACTACCTGAT CGGCCTGCGT GAAGGCCTCG AGGCCGCGCT GGTCGTGAGC 
ATCCTGATCG CCTACCTGGT CAAGGTTGGC CGACGGGACC GGCTGGTGGT CGTCGCCGGT
GGGGTGGCCC TGGCGGTCGC TGTCAGCGTC GCGTTCGGGG CGCTGCTGAC GTACACGTCG
ACGAGCCTGC TCGCGGACTT CAGGAGCCAG GAGATCTTCG GCGGCACGAT GTCCGCGATC
GCGGTGGTGT TCGTCACCGG GATGGTCTTC TGGATGCGTC GCACCGCCCG CAGTATGCGC
GCGGAGCTGG ACGGACGGCT CTCCTCAGCA CTGGAGCTGG GCACCTTCGC CGTCGTCCTC
ACGGCCTTCC TCTCGGTGGC CCGCGAGGGC CTGGAGACCG CCTTGTTCTT CTGGTCGGCG
GTGCAGGCCG CGGGAAGCAC GATGGAGCCG GTGATCGGTT TCTCGCTGGG CATTGCGACC
GCGGTGGTGC TCGCCTGGCT GCTGTACCGG CGGTCGGTCC GGCTGAACCT CGCCCGGTTC
TTCACCTGGA CGGGCGCCGG CCTGATCGTG ATCGCGGCCG GGGTGCTGGC CTACGCGATC
CACGACCTGC AGGAAGGCGG CGTCATCGGC GGGCTGAACA CCCTCGCCTT CGACGTCAGC
GAGCAGATCT CACCAGGGTC GTGGTACGGG TCCCTACTCA AGGGCGTCTT CAACTTCACC
CCGCAGACGA CCGTCGCCCA GGCGATCGCC TGGGTCGCCT ACATCGTCCC GGTCATGGCC
TTGTTTTTCC TCGGTCATCG GATCCGGTCC GGCCAGCCGA GCGAGCCGAG CGAGCCGAGC
GAGCCGCCGC CCGTCCCGTC GGGATCGACC AGTTGA
 
Protein sequence
MFANYLIGLR EGLEAALVVS ILIAYLVKVG RRDRLVVVAG GVALAVAVSV AFGALLTYTS 
TSLLADFRSQ EIFGGTMSAI AVVFVTGMVF WMRRTARSMR AELDGRLSSA LELGTFAVVL
TAFLSVAREG LETALFFWSA VQAAGSTMEP VIGFSLGIAT AVVLAWLLYR RSVRLNLARF
FTWTGAGLIV IAAGVLAYAI HDLQEGGVIG GLNTLAFDVS EQISPGSWYG SLLKGVFNFT
PQTTVAQAIA WVAYIVPVMA LFFLGHRIRS GQPSEPSEPS EPPPVPSGST S