Gene Franean1_6942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6942 
Symbol 
ID5675255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp8459521 
End bp8459949 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content72% 
IMG OID641245791 
ProductCBS domain-containing protein 
Protein accessionYP_001511182 
Protein GI158318674 
COG category[T] Signal transduction mechanisms 
COG ID[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.828695 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGCCG GAGAACTGAT GACGCGCAAG CTCAGCATCG TGACACCCGA CGTGCCGGTG 
AAGGACGTCG CGCGGCTGCT CGCACTGCGG GGGGTCGGCG CCGCACCGGT GGTGTCGCCT
CAGGGTGAGC TGGTCGGCAT TGTGACGGAG GCGGATTTCA TCGCGCTGGA GGCTCGGCCT
GACTCGAGGC TGCACGCCCG CCCGGACCGG CTGGTCGCCG AGGACGTCCG CGGTGCGGTG
GAGGCGGCCG GGGTGCGCGG TTCGCCGCGG ATCGAGGTGC TGCACGGGCG GGTCCGGATC
TCGGACGTCG ACACCTCGGA TCTCGTGCTG CTGCGGCGGC TCGTGCGCGA CGTCCCCGGG
GTGCTGGGCC TGGAGATCGC ACAACCGGTC GGCGTGGCCG GCGCGAGGGG CGAGGAGGTC
GACCAGTGA
 
Protein sequence
MRAGELMTRK LSIVTPDVPV KDVARLLALR GVGAAPVVSP QGELVGIVTE ADFIALEARP 
DSRLHARPDR LVAEDVRGAV EAAGVRGSPR IEVLHGRVRI SDVDTSDLVL LRRLVRDVPG
VLGLEIAQPV GVAGARGEEV DQ