Gene Franean1_6920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6920 
Symbol 
ID5675233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp8428543 
End bp8429589 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content75% 
IMG OID641245769 
Productaminoglycoside phosphotransferase 
Protein accessionYP_001511160 
Protein GI158318652 
COG category[R] General function prediction only 
COG ID[COG3173] Predicted aminoglycoside phosphotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGCCC TCCCGACGGC ACCCGAGCCC CTCGGTATCG AGGCCGGGGC GCTTGACCGC 
TGGTTCGGTG AACATGCGGC GGGCGCGGTG CCGCCGCTGC GCTACGACCG GGTCACCGGC
GGCCACTCGT GCCTCACCTA CCTCGTCAGC GACGCCGGTC ACCAGCGGTA TGTGCTGCGC
CGGCCGCCGG TCGGCGCGCT GCTCGCGACC GCCCACGACG TCACCCGCGA GGCGCGGATC
CTGGCCGCGC TCGCCGGCTC CGGCGTGCCG GTGCCGCGCG TACTCGGCGT CTGCGACGAC
CCGGAGGTGA CCGGCGCGCC CTTCTACGTG ATGGCCTACG TGGACGGGCT CGTGCTGCGC
ACCGCGGCCG ACTCCGAGGC CCTCCTCCCC TCCCCGCAGG CCCGCCGCCG CGCCGGGTAC
GCGCTCGTCG ACACCCTCGC CGCACTGCAC GCCGTCGACG TCGACACGGT CGGCCTCGGC
GCCCTGTCCC GGCGGGACGG CTTTCTCGAC CGGCAGCTCA GGCGCTGGTC GGCGCAGTGG
GCGGCCTGCG AGCTCGGGGA CATGGGCGGC ATGGCCGCGC TGCACGACTG GCTCGTCGCC
CACCGGCCCG CCGAGTCCAC GGCGCGCCTC GTGCACGGCG ACTTCCGGCT CGGCAACGCG
CTCCTCGGCC CCGACGGGGA CGTCCTGGCC CTGCTGGACT GGGAGCTGTG CACTCTGGGC
GACCCGCTCG CCGACGTCGC CTACCTGCTG CGCACCTGGT CGACGCCGGA CGCGCGGGCG
AGCCAGGAGC GGCTGCCGTC CGCGCTGCCA GGGTTCCCCA CGACGGACGA GCTGGCCGCC
CGCTACGCGC GGCAGTCCGG CCGCTCGATC GCGGAGCTCG ACTACTGGAT GGCGTTCACC
GCCTGGCGGG CCGCCGCCAT CCTGGCCGGC GTGTACCGGC GCTACCTCGA CGGGAAGATG
GGCACACCGC CCGACGATCT ACCCACGTTC GCGACCGAGG TCGAGGCACG CGTCCGGCAG
GGCCTGTCCT TCACTCGGAG GGCCTAG
 
Protein sequence
MDALPTAPEP LGIEAGALDR WFGEHAAGAV PPLRYDRVTG GHSCLTYLVS DAGHQRYVLR 
RPPVGALLAT AHDVTREARI LAALAGSGVP VPRVLGVCDD PEVTGAPFYV MAYVDGLVLR
TAADSEALLP SPQARRRAGY ALVDTLAALH AVDVDTVGLG ALSRRDGFLD RQLRRWSAQW
AACELGDMGG MAALHDWLVA HRPAESTARL VHGDFRLGNA LLGPDGDVLA LLDWELCTLG
DPLADVAYLL RTWSTPDARA SQERLPSALP GFPTTDELAA RYARQSGRSI AELDYWMAFT
AWRAAAILAG VYRRYLDGKM GTPPDDLPTF ATEVEARVRQ GLSFTRRA