| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6904 |
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| Symbol | |
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| ID | 5675217 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 8411592 |
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| End bp | 8413013 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641245753 |
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| Product | glutamate decarboxylase |
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| Protein accession | YP_001511144 |
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| Protein GI | 158318636 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
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| TIGRFAM ID | [TIGR01788] glutamate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCTAC ACGGCCGGGC GAGAGGCAGG CGCGGCGACC AGGCCGTGGA GGTACGGCCG
CACCTGGTCA TCCCGGACGA GGACGGGCCC GTCCCCCGGT ACCGCATGCC GCGCTCCTCG
ATGTCCGCCG AGACCGCCTA CCAGATCGTG CGCGACGAGC TGATGCTGGA CGGCAACGCC
CGACTGAACC TGGCCACGTT CGTGACCACC TGGATGGACG AGCACGCCGA CCGGCTGATG
ACCGAGTGTG CGGCGAAGAA CATGATCGAC AAGGACGAGT ACCCGCAGAC GGCCGAGCTC
GAGGCGCGGT GCGTCAACAT GCTCGCCGAC CTGTGGCACG CCCCCGACGC CACCGACGCC
GTCGGCTGCT CGACGACCGG GTCCTCCGAG GCGTGCATGC TCGCCGGGCT GGCGATGCTA
CGCCGGTGGC GCTCGACCAG GGAGCCCCAC CGCGGGGAAC AGGGCGGCGG GCAACGGGGC
ACCGGTGCGC GGCCGAACAT CGTCATGGGT GCCAACGTGC AGGTGTGCTG GGAGAAGTTC
GCCCGCTACT GGGACGTCGA GCCCCGGCTG ATGCCACTCG CGCCCGGGCG GACCCACCTC
ACCGCCCCGG AGGCCGTCGC CCGCTGCGAC GAGAACACGA TCGGGGTCGT GGCCGTCCTC
GGCTCGACGT TCGACGGGAC GTACGAGCCG GTGGCCGAGA TCGTCGCCGC GTTGGACCAG
CTGGCGGCCT CGGGCGGCCC GGACGTCCCG GTGCACGTCG ACGGGGCTTC CGGCGGGTTC
ATCGCCCCGT TCTGCGACCC CGACCTGGTC TGGGATTTCC GGCTCGAGCG CGTGGTCTCC
ATCAACGCCT CCGGGCACAA GTACGGGCTG GTCTATCCCG GGGTCGGCTG GGCGCTCTGG
CGCGACGCCC GGCACCTTCC GGCCGAGCTC GTCTTCGACG TGGACTATCT CGGCGGCTCG
ATGCCGACCT TCGCGTTGAA CTTCTCCCGG CCGGGAGCAC AGGTCGTCGC GCAGTACTAC
TCTCTGCTAC GACTCGGCCG GGCCGGTTAC CGGCATACCG CCCGCACGTG CCGTGACAAT
GCGCGTTGGC TGGCGGATGA AATCGCGAAG CTCGGCCCGT TCGAGCTGAT CTCGGACGGT
TCGGGGATCC CGGCCTTCGC GTTCACGACG AGGGATGCGG CCGAGTTCAG CGTCTTCGAG
GTCTCCGAGG CGCTGCGCGC CCGTGGCTGG CTGGTGCCCG CATACCGATT CCCGCCTGAT
CTGGCCGAGC TGGCGGTACT GCGGATCGTC GTGCGGGCCG AGTTCAGCCG GGATCTGGCG
CATCTGCTGG TCGAGGACCT GCACCGGGTG GTCGGACGAC TCTCCGGCCC CCGGTGGCGG
ACCGCGGCCG GCGGCGCCGA TCTCGCGTCG TTCCACCATT GA
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| Protein sequence | MALHGRARGR RGDQAVEVRP HLVIPDEDGP VPRYRMPRSS MSAETAYQIV RDELMLDGNA
RLNLATFVTT WMDEHADRLM TECAAKNMID KDEYPQTAEL EARCVNMLAD LWHAPDATDA
VGCSTTGSSE ACMLAGLAML RRWRSTREPH RGEQGGGQRG TGARPNIVMG ANVQVCWEKF
ARYWDVEPRL MPLAPGRTHL TAPEAVARCD ENTIGVVAVL GSTFDGTYEP VAEIVAALDQ
LAASGGPDVP VHVDGASGGF IAPFCDPDLV WDFRLERVVS INASGHKYGL VYPGVGWALW
RDARHLPAEL VFDVDYLGGS MPTFALNFSR PGAQVVAQYY SLLRLGRAGY RHTARTCRDN
ARWLADEIAK LGPFELISDG SGIPAFAFTT RDAAEFSVFE VSEALRARGW LVPAYRFPPD
LAELAVLRIV VRAEFSRDLA HLLVEDLHRV VGRLSGPRWR TAAGGADLAS FHH
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