| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6840 |
|---|
| Symbol | |
|---|
| ID | 5675153 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 8340332 |
|---|
| End bp | 8341522 |
|---|
| Gene Length | 1191 bp |
|---|
| Protein Length | 396 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641245689 |
|---|
| Product | DNA (cytosine-5-)-methyltransferase |
|---|
| Protein accession | YP_001511080 |
|---|
| Protein GI | 158318572 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0675] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.643066 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCGCT ACCGGCTCGA CCCGGCACCC GAACAGGTCG CTGGAATCGA GGAGCACTGC
GGGCACGCGC GTTTTGTTTG GAATCTTGCG GTCGAACAGC AGTCGTGGTG GAAGCCCGGC
CAGGGAAGGG CGCCGAACCA TGCGGAGCGT TGCCGGCAGT TGACCGAAGC GCGGGCAGAG
TTCGAGTGGC TGCGAGCCGG TTCGCAGACC GTTCAGCAGC AGGCGCTTCG AGACTTCGAC
CAGGCTATAC GGAACTTCTT CAACGGCTCG CACCGCCACC CGACCTTTCG GAAACGTGGC
CGGTCCGAGG GTTTCCAGAT CGTAGGGAAG AACGCACGGG TCGAGAAGCT GAACCGGAAG
TGGTCCCAAT GCTGGATCCC GAAGGTCGGC TGGGTGAAGT TCCGCGTGTC GCGGATAATC
CCGGACTTCA GGTCGTACCG GGTGACCCGG GACCGGGCGG GCCGCTGGCA TGTGGCGTTC
GCCGTAGCAC CCGACCCGGT CCCCGCGCCA GGAACCGGTG AGGTCGGCGA GGTCGTCGGT
GTGGACCGGG GTGTCGCCGT GTCCGCGGCG CTGTCCACCG GGGAGCGGCT GTCCTGCCCG
ACGCTGAGGC CGAAGGAAGC CGAACGACTC CGCCGGCTCC AGCGCCGGCT GGCGAAAGCC
ACACGCGGGT CGAACCGGCG CGGCCGGCTG AGGACCCAGA TCGCCCGGGT GAAGGCCCGG
GAGGCCGACC GGCGGAAAGA CTGGGTGGAG AAAACCTCCA CCGATCTTGC CCGCCGGTTC
GACGTCATCC GGGTGGAAGA TCTCCGCATC ACGAACATGA CCCGGTCGGC CCGAGGCACT
GTCGAACAGC CGGGCCGGAA TGTTCGGCAG AAAGCCGGAC TGAACCGGGG CATCCTCGCC
AACGGCTGGG GTCTGCTTGC CCGGCGGTTG GAACAGAAAG CACCCGGCCG GGTGGAGAAG
ATCCCGGCCG CCTACACCAG TCAGTGTTGC TCGTCCTGCG GGCATGTGGC GCCCGGGAAC
CGCGAGAGCC AAGCGGTGTT CCGGTGCGTC GCCTGCGGAC ACACGGCCAA CGCGGACGTG
AACGCTGCAT GCAACATCGC GGCTGGACGG GCCGTGACCG CGCGGGGAGG CGCAGCATTG
GCCGCGAACC GCGAACCTCA ACACTCCACG CCTCCTCTGG TGGATGGGTA G
|
|---|
| Protein sequence | MSRYRLDPAP EQVAGIEEHC GHARFVWNLA VEQQSWWKPG QGRAPNHAER CRQLTEARAE
FEWLRAGSQT VQQQALRDFD QAIRNFFNGS HRHPTFRKRG RSEGFQIVGK NARVEKLNRK
WSQCWIPKVG WVKFRVSRII PDFRSYRVTR DRAGRWHVAF AVAPDPVPAP GTGEVGEVVG
VDRGVAVSAA LSTGERLSCP TLRPKEAERL RRLQRRLAKA TRGSNRRGRL RTQIARVKAR
EADRRKDWVE KTSTDLARRF DVIRVEDLRI TNMTRSARGT VEQPGRNVRQ KAGLNRGILA
NGWGLLARRL EQKAPGRVEK IPAAYTSQCC SSCGHVAPGN RESQAVFRCV ACGHTANADV
NAACNIAAGR AVTARGGAAL AANREPQHST PPLVDG
|
|---|
| |