| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6802 |
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| Symbol | |
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| ID | 5675115 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 8293214 |
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| End bp | 8294845 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641245651 |
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| Product | high-affinity nickel-transporter |
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| Protein accession | YP_001511042 |
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| Protein GI | 158318534 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2215] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCTCGC TGCGTCGGGC AGCCGTCCTG GCCGTGACGG TGGCCGCGTT CGTCCTGGCG
GCGGGCGGAT CCGCATCGGC ACATCCCCTC GGGAGTTTCA CCGTCAACAG CGCGAGCGTG
CTGAGGGTGG GCATCGAAGA GGTTCTCGTC GACGTGGTCG CCGACTTCGC CGAGATACCG
GCGGCGCAGG TCCGGCCGGA CGTCGACGCG CTGGGAGCCG CCCGCTGGCG GGAAGCGGAG
TGCGCCCGCA CGGCCGGACG GGCGACGCTG GCGATCGACG GCCGGGCCCG CCCGCTCGTC
CCGATCGGCG GCTCGCTGTC GTTCCCACCG GGCGACGGCG GGCTGTCGAC GATGCGGCTG
GTCTGCCGAT ACTCCGCCGA GACCGCCGGG GCAGCGGACA CGGACCCTGA CACGACAATT
CGGTACACGC TGGCCGCGTA CGCCGACCGG GTCGGCTGGC GGGAGACGGT CGCGGTCGGG
GACCGCACCA CGGTGGTCTC CTCGGACGTA CCGTCCCGCT CACCGACGAA CCTGTTGACC
CGGTACCCCG ACGACCCGCT GGGCGGCGGT TCCGACGTCA CGCGCGCGAC GCTGACCGTT
CGTCCGGGCG GACCGGCCGC GGCCGACCCG TTGTCGCAGG CGGGCGCCAT CGGCGCTGGA
ACGCCTGGTA GCGGTGCGTC AGACGAGGCC CGGCAGGCGG CCGGCGGCCT CGCCGGTTGG
GTGAACGGCC TGGTCGAGCG GGACTCCTTC TCACTCGGCC TGGGCGTGCT CGCACTGCTC
GCCGCGGTCG TGTTGGGGAC AGCGCACGCG TTCGCCCCCG GGCACGGCAA GACGGTGATG
GCGGCCCGGG TCGTCGGCGG CTCGGCGACA GGACGGCAAC TCGCCGCCAC CGCCGGAGCG
GTCACGCTCA CCCACACCCT CGGCGTTCTC GTCCTCGCGG TCGTGCTGTC GGCGTCGAGC
GGCTTCGCTC CGGAGAAGAT CTATCCGTGG CTCGGTGTCG CGAGCGGGTT GCTGATGATC
TGTCTCGGCG CCAGTCTGCT GCGGTCAAGA CTGATCATGT CGCCGTATCG CCACCTGTTG
TCCACAGGCG ACGGCCACTC GAATCACCAC CGCCATGAAC ACGACCGTGG ACACAGCCAC
GCCCGTCCTC AACGCGACGA CAGCCATCAC CGCCACCATG GCAGCGGCAT TCACAGCCAT
GGGCACCACG ACCACGACCC TTCGCGCGAT CATGGTCATG CGCACCAGCA CGGTCACTCG
CATGGCGGGC GCTGGCACGT GCACCCGCCC GTCACCGACC AACCGAGGCT ACGCAGCCTG
CTCGCCGCGG GACTCGTCGG CGGCATGGTG CCGACGCCGT CGGCCGTCGT CGTGCTGCTT
GGAGCGGTCG CACTGGGGCG GGCATGGTTC GGGGTCCTGC TGGTTCTCGC CTACGGCGTG
GGAATGGCGG CGACGCTGGT CGGCGTCGGG TTCCTGCTCG ACCGCACACT CATCCCGCTG
CTCCAGCGCA CCCAGACGCT GGTGCCGGGG TTCGCCGCCG GCCTGCGTTG GACGCCGGTG
GCGACAGCCG CCCTGGTCGT GCTCGTCGGC GCCGTCGTGG CGCTGCGTGC CGGCAGCCAG
GTCACGATAT GA
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| Protein sequence | MTSLRRAAVL AVTVAAFVLA AGGSASAHPL GSFTVNSASV LRVGIEEVLV DVVADFAEIP
AAQVRPDVDA LGAARWREAE CARTAGRATL AIDGRARPLV PIGGSLSFPP GDGGLSTMRL
VCRYSAETAG AADTDPDTTI RYTLAAYADR VGWRETVAVG DRTTVVSSDV PSRSPTNLLT
RYPDDPLGGG SDVTRATLTV RPGGPAAADP LSQAGAIGAG TPGSGASDEA RQAAGGLAGW
VNGLVERDSF SLGLGVLALL AAVVLGTAHA FAPGHGKTVM AARVVGGSAT GRQLAATAGA
VTLTHTLGVL VLAVVLSASS GFAPEKIYPW LGVASGLLMI CLGASLLRSR LIMSPYRHLL
STGDGHSNHH RHEHDRGHSH ARPQRDDSHH RHHGSGIHSH GHHDHDPSRD HGHAHQHGHS
HGGRWHVHPP VTDQPRLRSL LAAGLVGGMV PTPSAVVVLL GAVALGRAWF GVLLVLAYGV
GMAATLVGVG FLLDRTLIPL LQRTQTLVPG FAAGLRWTPV ATAALVVLVG AVVALRAGSQ
VTI
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