| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6720 |
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| Symbol | |
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| ID | 5675033 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 8168399 |
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| End bp | 8172091 |
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| Gene Length | 3693 bp |
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| Protein Length | 1230 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641245568 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001510960 |
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| Protein GI | 158318452 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1204] Superfamily II helicase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTCGGTT GGCGTCGGAA TCCGAGGGGC AGGGCCGAGC CGCCGGTTTC CGGGAGGCAT
TCCGCGTCGG CTGTCGAACC TTCCGGACCG ACGCCGAGCG CTTCCGGATC ATCCGATGAG
GCCTTGGCCT CTGCCATCGG CACCTTCTTG TCGGCCGATG GCGCAGGCTC CGATCAATCC
GAAACGGCGG GGTTTCCGCC TGCTGAGTCT CCCCTGGTCG ATGTCGCCGG CGACCCTGCC
TATCGCGACC GGGTAGATGG AGTGTCCGGT AGCCACGAGT GGATCACCGA CGGCGGCGCC
GATGGTGGCG GTGGCGGTGG CGAGGACAGC GGCCCGAGTT GCTGGCCTGG GCCAGGCGAT
GACGGTTCGG GCTCCGCTCA CACCGACGGC GCGGGGACGG ACGAGCGCAC AAGCGTCACG
GATATCGCGC GGGCCCGGTG GGGGATCTCG CCTCAGCTGG CGCACGAGCG GTTCGGCCAG
TCGGGCTGGT CCTACGACGA CGTCGCGCCG CGTGGCTGCC CGCGATGCAA CGGCACGCTG
CACTGCCTCC GAAAGTCCTA TGTGAGCGGC GGACGGCCGC AACGCTACGT CGCCCTGGTG
TGCCCGCCTT GCGCGGCAAC GTTCACCTTG GCGGATCTGG GTGTACGGAC CTTCGACGAG
CTGCGGCCTC GGCGGAGTGC CTCCCGTCGG GGCAGGGTGG CGTCTCCGGG ACCCTCGTTC
GTTGACGACG GCCCGCTCCC CGGTGGGATG AGGATGGGTG TCGCCCCCGC CGAGAACGCC
TGGAAGCTCA CCGCGGAGCT GCTCGACCCG CGACTCGCGC CGGGCTACTT CGCGGCGAGC
GCGCCGCGGC CGGGGTCCAC CGCCGTCTCC GTTCCTGATC TCGGAACACC GCAACCGATG
ACCGAGCGCA GGCTCCTGCA CTGGTGCAAG ATCGCGGACC CGTGGGCCGA TGTCCCGTCC
CGGCCGGATG GGGTGGACGT GCGCGTGCTG GTCCCGCTGG CGGCGGACTT CGACGCGCTG
TGCGCGCTGA TGAGCGCCGC CGGGGTGCCA CATCGGCGGG TGCGCCACTG GGTCGAGGCG
GAGACCGTCA GCACAGTCGG GCCGGATGGC GCGCTGGCCG CGCTACGCGC GGTACCCGGT
TTCCTCCCGG CCACGAACAC CGCGAAGCTG CGGGCGGCGG GCGTCGTCGG AATGGCCGCC
GAGGCGGCCC GGGACGCGTT CGAGCTGGCC TGGGACAACC ACGGTGAGCC GTTCCTCCCG
GCCTGGAGCC CCGTCCACGC CCGGACGGTC GTGCCCGCGG ACTGGGTGCC GTACCTGCCC
CATCCCGGGC TGAACCCGGC GCAGGCGGAG GCCGCGCCGC ACGTGCTGAG CGACAACACC
CACCTTCTCG TCGCCGCGCC GACCGGGTCG GGTAAGACCG CGATCGGCAT GCTCGCCGCG
CTCAAGGCCA TTCTCGGTGA GGGACGTAAA GCGGCCTGGT TGGTGCCGCA GCGGTCGCTG
ACCGACGAGC TCGACCGCGA GCTCGCCACC TGGCGTGCGC GGGGGCTGCG GGTGGAGCGT
CTTTCCGGCG AGCACGTGGT TGATGTGGAG CGGGCCCGCG CGGCCGATCT GTGGGTGTCG
ACGACGGAGA AGTTCGAGTC GGTGTGCCGG GCGACGTCGC TGCGCGCCGC GCTGGGTGAG
GTGGGCTGCC TGGTCATCGA CGAGATCCAT CTGCTGGGCA GTGCCGGGCG GGGGCCGTTG
CTGGAGGCGT TGCTGGCCCG GGTGCGTGGT GTGGAATCAC CGGTGCGGAT CGTCGGGTTG
TCGGCGACGG TCGCGAATGC CGAGGAGGTC GCCGGGTGGC TCGGCGCCCG CGTCGTGACG
ACCACGTGGC GCCCGTCCCG GTTGACCTGG CAGCTGCCGA TGATCCCGGC CACCGCTGAC
CGCAAGACCG ACAATGCCAA CAGGCTGCGG GCGGTCACGG CGCTGACGCG CATGGTCACC
GATGACGGTG GCAGCGTGCT GGTGTTCTGC GGAAGCCGGC GCAATGTCCG CGCGACCGCG
CTCACGATCG CGGCCGATCG GGGCGCGGAC ATCCGCGGCA TCGACCCGGA TGACGGCTCC
CGCGTCCACC AGGTGTGCAC CGCGGTCGGG GTGGGTCTGC ACTACAAGGA CTGGGAGCAC
CGCCACGAGG CGGAACGCGC CTTCCGCGCC CGCGGTCTGG ATGTCCTCGT CGCGACGACG
ACGGTGGCGG CCGGGGTGAA CCTGCCCGCG CGGGCGGTCG TCGTCCGGGA CACCCGCATC
GGTCTGGACA AAATCGACGT GGCGACGGTG CAGCAGATGT TCGGCCGGGC CGGCCGGGTC
GGCGTCGGGG AGACCGAGGG ATGGTCCTAC CTGGTCGTCG ACGAGACGGA GCGGGCGACC
TGGCAGAACC GGCTCGTCGA GGGGTACGCG GTCCGCTCCC ACATCGCGGA CAGCCTGGCC
GATCATCTGC TGGCGGAGGC GGCTCAACAG CGCGTCCACA CCCTCGCCGA CGCGGAGAAC
TGGTGGCTGC GCACGCTGGC TCATCATCAG GGCGCCGAAG GGCTCACGCC GGTGCGGGAT
GCCGTCGACC TGCTGGTAGA GGGCGGGTAC GTCGCGCTGG TCGCCGAGCC GGATGTCGGC
ACGGTACTCA GGGTCACCGA GCTGGGCAAG CTGACGACCC GGTTCATGGT TCCGGTCGAG
ATCGGCACGC AGCTGCGGGG CCTGCTCGCG GAGGTCGACC GGCGGCCCCA CGACCCCGAG
GACGCCGAGC GGCTGCTCGG GCTGGCGATC GGCGTCGGTG TCCCGCAGTT CGCCGAGGCC
CCGGTGACGG ACGATCTGCG CCCCCAGGTG GCACGGCTGC TGCGCGCCCG GGGGTATCTG
GAGCGGGTTG ACGCCCCGGG GGGCGCGCCC GGTCTCGCTC CGTCAACCGC CGTGGCGCCG
GGCGATCTGG CACAGGTCGC GATCGCGCTG GTCGCGAACA GTCCGCGGGT GTTCAGCCGG
CCGGCGAGGA GGATCGCCGG GCTGCCGTCC TCGGTCCTGC TGCCGATTCT CAGCGAGATG
CCGCGCTATT TCGCCTGGCT GGCAGCACAG GGTGAGCTGG CCACCGTCGC GCCGTGGGTC
GCCGTCATCG CGGGGGATCT CGGCCGGCGC ATCCGCTGGC GGCAACTCGG GCCCACCCGT
GGCGCGGGCC GGTTGCTGTG GATGTGCGAG CAGATGGCGA CCCCACTGCG AGCGGAGCGC
ATCGTGCCAC TGCTGTTCAC AGCCGCCCGC GGACGCGGTG TGACGGCCCC GGACTGGCCG
GTGGGCCGTG CCCCGGCCCA GTGCCAGCTG GACGCCCAGG AATACCTGGC GCTGTTGCGC
GACCGGGCGA CCGACACCAC CGTCACCGAG GCCGACGACC GTGTGAAGGT CACCGCGCCG
AACGGGACCA CGGCGGTGGC CTGGGCAGGT CACCAGCACG CCGTCATCGG GTCGCCGGCC
GGGCAGTGGA CGTCCTATCC GGGTACCGGA GCGCCTGCCC CCAATACCGC TAACGGTTTC
GGTGGGGCTA ACGGTCCCGC CGGCTATCCA CGCGAGGCCC ACGCGCCGGC CCCGGAACGC
GGGGTCAGCG TGTTCTCCCG GCGGGGCGAC CACGTGAGCA CGGGCTGGCT CAGCAGCTAC
AACGGGATCC ACGACCAGAC GGGGTTCGCC TAG
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| Protein sequence | MLGWRRNPRG RAEPPVSGRH SASAVEPSGP TPSASGSSDE ALASAIGTFL SADGAGSDQS
ETAGFPPAES PLVDVAGDPA YRDRVDGVSG SHEWITDGGA DGGGGGGEDS GPSCWPGPGD
DGSGSAHTDG AGTDERTSVT DIARARWGIS PQLAHERFGQ SGWSYDDVAP RGCPRCNGTL
HCLRKSYVSG GRPQRYVALV CPPCAATFTL ADLGVRTFDE LRPRRSASRR GRVASPGPSF
VDDGPLPGGM RMGVAPAENA WKLTAELLDP RLAPGYFAAS APRPGSTAVS VPDLGTPQPM
TERRLLHWCK IADPWADVPS RPDGVDVRVL VPLAADFDAL CALMSAAGVP HRRVRHWVEA
ETVSTVGPDG ALAALRAVPG FLPATNTAKL RAAGVVGMAA EAARDAFELA WDNHGEPFLP
AWSPVHARTV VPADWVPYLP HPGLNPAQAE AAPHVLSDNT HLLVAAPTGS GKTAIGMLAA
LKAILGEGRK AAWLVPQRSL TDELDRELAT WRARGLRVER LSGEHVVDVE RARAADLWVS
TTEKFESVCR ATSLRAALGE VGCLVIDEIH LLGSAGRGPL LEALLARVRG VESPVRIVGL
SATVANAEEV AGWLGARVVT TTWRPSRLTW QLPMIPATAD RKTDNANRLR AVTALTRMVT
DDGGSVLVFC GSRRNVRATA LTIAADRGAD IRGIDPDDGS RVHQVCTAVG VGLHYKDWEH
RHEAERAFRA RGLDVLVATT TVAAGVNLPA RAVVVRDTRI GLDKIDVATV QQMFGRAGRV
GVGETEGWSY LVVDETERAT WQNRLVEGYA VRSHIADSLA DHLLAEAAQQ RVHTLADAEN
WWLRTLAHHQ GAEGLTPVRD AVDLLVEGGY VALVAEPDVG TVLRVTELGK LTTRFMVPVE
IGTQLRGLLA EVDRRPHDPE DAERLLGLAI GVGVPQFAEA PVTDDLRPQV ARLLRARGYL
ERVDAPGGAP GLAPSTAVAP GDLAQVAIAL VANSPRVFSR PARRIAGLPS SVLLPILSEM
PRYFAWLAAQ GELATVAPWV AVIAGDLGRR IRWRQLGPTR GAGRLLWMCE QMATPLRAER
IVPLLFTAAR GRGVTAPDWP VGRAPAQCQL DAQEYLALLR DRATDTTVTE ADDRVKVTAP
NGTTAVAWAG HQHAVIGSPA GQWTSYPGTG APAPNTANGF GGANGPAGYP REAHAPAPER
GVSVFSRRGD HVSTGWLSSY NGIHDQTGFA
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