Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_6643 |
Symbol | |
ID | 5674958 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 8072401 |
End bp | 8073054 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641245494 |
Product | deaminase-reductase domain-containing protein |
Protein accession | YP_001510886 |
Protein GI | 158318378 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0262] Dihydrofolate reductase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGTCTCGTG TACGAGTCCA CAACTTCTCC GTCTCCCTCG ACGGTTATGG CACCGGCGAG GGGCAGAGCC TCGAAAGGCC GTTCGGTCAC GCCGAGGGGC GGTTGCACGA CTGGTTCTTC CACACCAGGT CGTTCCGCGC GATGCACGGC GAGGACGGCG GAGACACCGG GGTGGACGAC GCACTTGCCG GAGCATGGGA GCCGGGCATC GGCGCGGAGA TCATGGGGCG GAACAAGTTC GGGCCGCAGC GCGGCCCCTG GGAGGACCAC GAATGGACGG GGTGGTGGGG CGAGGATCCC CCGTTCCACA CGCCGGTCTT CGTCCTGACC CACCACCCCC GCCCGCCGTT GGTGATGAAG GGGGGCACGA CGTTCCACTT CATCGACGCC ACCCCGCAGG AGGCGCTCCG CCAGGCACGG GAGGCCGCCG GCGGCCTCGA CGTCCGGATC GGTGGCGGGC CGACCATGGT CCGCGACTTC CTGGCAGCGG ATCTGATCGA CCACCTGCAC GTGGCCGTCG TGCCGATCCT CCTCGGCCGC GGGGTGCGGC TGTGGGAGGG CCTCGAGGAG ATGGAGAAGC GCTTCACCGT CGAATCCACG ACGACCCCCA GCGGCATCAC CCACGTGACC TTTACCCGAC CCGCCGATCA ATGA
|
Protein sequence | MSRVRVHNFS VSLDGYGTGE GQSLERPFGH AEGRLHDWFF HTRSFRAMHG EDGGDTGVDD ALAGAWEPGI GAEIMGRNKF GPQRGPWEDH EWTGWWGEDP PFHTPVFVLT HHPRPPLVMK GGTTFHFIDA TPQEALRQAR EAAGGLDVRI GGGPTMVRDF LAADLIDHLH VAVVPILLGR GVRLWEGLEE MEKRFTVEST TTPSGITHVT FTRPADQ
|
| |