Gene Franean1_6643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6643 
Symbol 
ID5674958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp8072401 
End bp8073054 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content69% 
IMG OID641245494 
Productdeaminase-reductase domain-containing protein 
Protein accessionYP_001510886 
Protein GI158318378 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0262] Dihydrofolate reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCTCGTG TACGAGTCCA CAACTTCTCC GTCTCCCTCG ACGGTTATGG CACCGGCGAG 
GGGCAGAGCC TCGAAAGGCC GTTCGGTCAC GCCGAGGGGC GGTTGCACGA CTGGTTCTTC
CACACCAGGT CGTTCCGCGC GATGCACGGC GAGGACGGCG GAGACACCGG GGTGGACGAC
GCACTTGCCG GAGCATGGGA GCCGGGCATC GGCGCGGAGA TCATGGGGCG GAACAAGTTC
GGGCCGCAGC GCGGCCCCTG GGAGGACCAC GAATGGACGG GGTGGTGGGG CGAGGATCCC
CCGTTCCACA CGCCGGTCTT CGTCCTGACC CACCACCCCC GCCCGCCGTT GGTGATGAAG
GGGGGCACGA CGTTCCACTT CATCGACGCC ACCCCGCAGG AGGCGCTCCG CCAGGCACGG
GAGGCCGCCG GCGGCCTCGA CGTCCGGATC GGTGGCGGGC CGACCATGGT CCGCGACTTC
CTGGCAGCGG ATCTGATCGA CCACCTGCAC GTGGCCGTCG TGCCGATCCT CCTCGGCCGC
GGGGTGCGGC TGTGGGAGGG CCTCGAGGAG ATGGAGAAGC GCTTCACCGT CGAATCCACG
ACGACCCCCA GCGGCATCAC CCACGTGACC TTTACCCGAC CCGCCGATCA ATGA
 
Protein sequence
MSRVRVHNFS VSLDGYGTGE GQSLERPFGH AEGRLHDWFF HTRSFRAMHG EDGGDTGVDD 
ALAGAWEPGI GAEIMGRNKF GPQRGPWEDH EWTGWWGEDP PFHTPVFVLT HHPRPPLVMK
GGTTFHFIDA TPQEALRQAR EAAGGLDVRI GGGPTMVRDF LAADLIDHLH VAVVPILLGR
GVRLWEGLEE MEKRFTVEST TTPSGITHVT FTRPADQ