Gene Franean1_6637 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6637 
Symbol 
ID5674952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp8068585 
End bp8068944 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content70% 
IMG OID641245488 
ProductHxlR family transcriptional regulator 
Protein accessionYP_001510880 
Protein GI158318372 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGGACT GCCGTATCCG GGCGGTGACC GACCTGTTCA TCCACATCTG GGACCCGGTC 
GTGCTGGTGG CTCTTCGCGC GGGGCCGTGC CGGCGCCGCG AGCTGCGCGT CGCGATCGGC
GGTATGAGCG ACAAGGTCCT CACCGAATCG CTACGCCGGC TCGGCGCCTA CGGTCTGGTG
GCCCGCCGTG CGTTCGCGCA GGCCCCGCCG CGGGTCGAAT ACGCGCTGAC TCCACTCGGG
CAGAGCCTGG TGGACGGTCC GATGGAAGCG CTCGGAAACT GGATCACCGA GCATGGCGAG
GAACTACAGG ACGCGCAGGA CAGATCGGCG GAGCTCCAGG CGCGTACCGG CGCTGACTGA
 
Protein sequence
MADCRIRAVT DLFIHIWDPV VLVALRAGPC RRRELRVAIG GMSDKVLTES LRRLGAYGLV 
ARRAFAQAPP RVEYALTPLG QSLVDGPMEA LGNWITEHGE ELQDAQDRSA ELQARTGAD