Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_6634 |
Symbol | |
ID | 5674949 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 8066343 |
End bp | 8066912 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641245485 |
Product | cupin 2 domain-containing protein |
Protein accession | YP_001510877 |
Protein GI | 158318369 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.718615 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACATTCA ACGCCCATAC GCCCGACGCC CATGCTCCGG ACGAATCGCC TTCAGTCGGG CCACAACCGG TTCGGGGCTT CGCGCGCGGC CGCGACGAGG GCCGTCGTAT CGACCTGCCG AACTGGTCGA TGCTCGTCAA GGTCACCGCT GGCGACACCC TCGGCCGGCT CACCGTGCTG GAGGGGCGGA TGGGCCCGCG GCAGCCCGGA CCGCTCCCGC ACGTTCACGA GGGCCACGAC GAGACGTTCG TGCTCGTCGA GGGGCGGCTG CGGTTCCGCG TCGGGAACGG GTTCCACACC GCCGCCGCGG GCGAGACGGT GTTCGCCGGT CGACGGCTGG CACACGGCTT CGGGAATCCC TTCGCCGAGC CGGCGCGCTA TATCGCCATC CTCACGCCCA GTGGTTACGA GGACTATTTC GACGAGGTCG CGGAGCACGC CGCCAGGACG GGTTCGCTGC CCGGCGAGGC GCTTACTCGG GAACTGATGG CGCGTCACCG GACGGTCCTC GCGCCGCCTC TGCCAGACCC CGGAGCCGCC CCGCCGCCCG AGGTGGACGC CGGATCGTGA
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Protein sequence | MTFNAHTPDA HAPDESPSVG PQPVRGFARG RDEGRRIDLP NWSMLVKVTA GDTLGRLTVL EGRMGPRQPG PLPHVHEGHD ETFVLVEGRL RFRVGNGFHT AAAGETVFAG RRLAHGFGNP FAEPARYIAI LTPSGYEDYF DEVAEHAART GSLPGEALTR ELMARHRTVL APPLPDPGAA PPPEVDAGS
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