Gene Franean1_6623 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6623 
Symbol 
ID5674938 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp8056340 
End bp8056690 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content66% 
IMG OID641245474 
ProductDGPFAETKE family protein 
Protein accessionYP_001510866 
Protein GI158318358 
COG category[S] Function unknown 
COG ID[COG3795] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGTGG ACCCAGCTGT GCTGGAGCAG CTCACCGACG ACCAGCAGGC GCGGATCCAG 
AAGGGACACA GCGCGTTCAT CGCCGCCACC AAGGAGCGCG GTGAGTTCAT TGCGACTCAG
GCCCTCGCCG ACCCCAGCCA GTCGAAGATC ATTCGCAGCT CCGGGGGACA GCCCGAGGTG
ACCGACGGAC CGTTCGTCGA GAGCAAGGAG TTCATGGGCG GCTTCTATCT CCTGGACGTC
GAGGACGAGG CCCGGGCGGT GGAGCTGGCC CTGCAGATCC CCGATGCCAA CATTCCCGGC
CTCGCTCTCG AGCTTCGGCC GGTGATGTTC GCCGATCTGG GAGAGGGATG A
 
Protein sequence
MQVDPAVLEQ LTDDQQARIQ KGHSAFIAAT KERGEFIATQ ALADPSQSKI IRSSGGQPEV 
TDGPFVESKE FMGGFYLLDV EDEARAVELA LQIPDANIPG LALELRPVMF ADLGEG