Gene Franean1_6619 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6619 
Symbol 
ID5674934 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp8053519 
End bp8053995 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content70% 
IMG OID641245470 
ProductMarR family transcriptional regulator 
Protein accessionYP_001510862 
Protein GI158318354 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAAGCC GGAGCGAGGA CGAACTCGAT GTGGACCAGG CTGTCCGCGC GCTGCTGCTA 
CTGATGCCGC AGCTGGTCGG GCGGGCGAAG CGGACGCCAC CACCCGCCGA GTTGGCTGGT
CTGGCGCTCG GCCCACGGCA TCTGTCGCTG CTGTCCTACC TGCTGCTCGA CGGCCCCACC
ACCGTCAACG CCCTGGCCAC ACGGCTTGAG GTCGCGCCGA CAACGGTCAG CCTCATGATC
GCCGACCTGG ACCGAGCCAA GATCGTTGAT CGCCGCGAGG ACCCCGACGA CCGCCGGCGC
AGGATCGTCA GCATCACTGC CGCGGGCCGC CCGGCGATCG AGGGATGGCT CGGCCCGGGC
ACCGCCGCGT GGCGGGAGGC GCTCCGACCA CTGACCCCGG CTGAACGCCA CCTGGTCGTC
AGCACCCTGC GCGCCTATGA ACGTGCCGTC AGCGAGCGAG GCTCAGACCC GAGTTGA
 
Protein sequence
MSSRSEDELD VDQAVRALLL LMPQLVGRAK RTPPPAELAG LALGPRHLSL LSYLLLDGPT 
TVNALATRLE VAPTTVSLMI ADLDRAKIVD RREDPDDRRR RIVSITAAGR PAIEGWLGPG
TAAWREALRP LTPAERHLVV STLRAYERAV SERGSDPS