Gene Franean1_6618 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6618 
Symbol 
ID5674933 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp8052581 
End bp8053429 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content70% 
IMG OID641245469 
ProductNmrA family protein 
Protein accessionYP_001510861 
Protein GI158318353 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0702] Predicted nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATTC TTGTCACCGG CGCCAGCGGG AACATCGGGT CGCGTCTGGT CGCCACGCTG 
GCCGGGTCGG GCTACCCGGT CCGCGGTTCG TCCCGCGACG CGACGACCCT ACGGCTGCCT
GCCGGCGTCG AGCTGGCCGA GCTCGATCTC GCCGACCCGG GTCCGTCCGC GGCGAAGGTG
CTGCGAGGGG TCGAGGCCGT GTTCCTGTAC CCGGTGATCG GTACTGTCGA CGCCTTCGTA
GCGGCGGCCG TGGACGCCGG CGTGCGTTAC GTGGTGCTGC TGTCCTCGCC GGCGGCCTAC
GAGGTCGGGG AGTTCAACCG GCCCATCGGG CAGATCCACC GGGCGGTCGA GCGGGCTGTG
GTCGACTCGG GTCTCGAACA CACGGTGTTG TATCCGAGCT GGCTCGCGAC CAACACCCGG
CGCGACTGGG CAGATCAGAT CCGGACCAGC GGGCGGGTCG CGATGGCGTT CGCGGACGCC
CCCGTCACGC CGATCCACCC CGACGACATC GCCGAGGTCG CCGCCCACCT GCTCACCAGC
GAGACCTTCC GCTCCCGGAT GCAGATCCTC ACCGGGCCGC GGTCGATGCG CATACGGGAC
GCGGTCGCGA TCATCGGCGA CGTGCTCGGT GCCGACGTGC CCGTCGACGA CGTGACCCGG
GGGCAGGCAC TGGACCTCGA CCAGGGCCGG ATTCCCCGTT CAATTCTGGA AACCCTGCTC
GACGTAGCCG CGGCGACCAT CGGGCAGACA GCCCCCGTCA CCAACACGGT CGAGCGGATC
ACCGGTCACC CAGCCCGGTC ACTGCGCTCC TGGCTCGAAG CCCACCGGAG CGACTTCCAA
CGCGGCTGA
 
Protein sequence
MTILVTGASG NIGSRLVATL AGSGYPVRGS SRDATTLRLP AGVELAELDL ADPGPSAAKV 
LRGVEAVFLY PVIGTVDAFV AAAVDAGVRY VVLLSSPAAY EVGEFNRPIG QIHRAVERAV
VDSGLEHTVL YPSWLATNTR RDWADQIRTS GRVAMAFADA PVTPIHPDDI AEVAAHLLTS
ETFRSRMQIL TGPRSMRIRD AVAIIGDVLG ADVPVDDVTR GQALDLDQGR IPRSILETLL
DVAAATIGQT APVTNTVERI TGHPARSLRS WLEAHRSDFQ RG