Gene Franean1_6570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6570 
Symbol 
ID5674885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7993921 
End bp7995171 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content73% 
IMG OID641245421 
Productmethyltransferase type 12 
Protein accessionYP_001510813 
Protein GI158318305 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2519] tRNA(1-methyladenosine) methyltransferase and related methyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAATCA TCACCGGCTC GGCCACGGCC ACGGGCACGG GCACGGGCAC GGGCACGCCC 
GACGGCACGT CCGCCTCGGT CGAGGCGTTC ACCCAACGGG TCTTCGACGC GGTGCTGGGC
GCCCAGGAGG TTCAGGCGAT CTATCTCGGC GACCGGCTCG GGTACTACGC CGCCCTCGCC
GAGCGCGGGC CCCTCACCTC CTCCGAACTG GCAGGCGCGA CCGGCAGCAC GGAGCGGTAC
GCCCGTGAGT GGCTCGAGCA CCAGGCGGTC TGCGGCTACC TCACCGTCGC AGCGGACGTC
GACCAGGACG AGAACGCGGA CCGTGGCGTG GATGGAAGCC GGGACGAGCA TGGCGACCCG
GGCGCGGGCG CGGAGCCCGC AGGAGACGGG CAGGCCGCGG GCACGGCCGA GGCGCTCTCC
CGCCGTTACC TGCTGCCCGC GGGGCACGCG GAGGTCCTCG CCGACGTCGA CAGCCTGAAC
TACCTGGCTC CGCTGGCCCG GTTCGTGGCC GGAGCGGGCC GGCAGCTCGG CGAGATCGCC
GAGGCGTTCC GGACCGGCGG AGGGGTGAGC TGGGAACGGT TCGGCGCCGA CGCGCGCGAG
GCCCAGGCCG CCGCGAACCG CCCGATGTTC CTCTCCCTGC TGTGCCAGGA GCTGCTGCCG
GCCGCTCCCG AGGTGCACGC CACGCTGGTC GCCGGCGCGC GCGTCGCCGA CATCGGCTGC
GGGGCGGGAT GGTCATCGAT CGCGCTGGCC CGCGCGTACC CCGGAGTGAC CGTCGACGGC
TTCGACCCGG ACACCGAGTC CGTGCGGCTC GCCGAGCGCA ACGCCGCCGC CTTCGAGGTG
ACCGACCGGG TCACCTTCAC CGACGCCGAC GCCGCGCAGG CCGCGGACGG CGAGGCGGTG
GGCGGCTACG ACCTGGTGTT CGCCTTCGAG TGCGTCCACG ACATGGCGGA CCCGGTTGCC
GTGCTCGACG CGGCACGCCG CCTGCTGACC GCCGGCGGCA GCATGATCGT CATGGACGAG
CGGTGCGCGG AGTCGTTCCA CGCCCCCGCG GGCGAGATCG AGCGGCTGCT CTACGGCTAC
TCGCTGATCG GCTGCCTGCC GGACGGGATG TCACGGCAGC CGTCGGTGGG CACGGGAACC
GTGATGCGCC CGGCGACGCT CGCCGGCTAC GCCGAACTCG CGGGTTTCAC CTCGACGGAG
ACGCTGCCCA TCGAGCACGA CTTCTTCCGG TTCTACCGCC TCGTCCCGTA A
 
Protein sequence
MTIITGSATA TGTGTGTGTP DGTSASVEAF TQRVFDAVLG AQEVQAIYLG DRLGYYAALA 
ERGPLTSSEL AGATGSTERY AREWLEHQAV CGYLTVAADV DQDENADRGV DGSRDEHGDP
GAGAEPAGDG QAAGTAEALS RRYLLPAGHA EVLADVDSLN YLAPLARFVA GAGRQLGEIA
EAFRTGGGVS WERFGADARE AQAAANRPMF LSLLCQELLP AAPEVHATLV AGARVADIGC
GAGWSSIALA RAYPGVTVDG FDPDTESVRL AERNAAAFEV TDRVTFTDAD AAQAADGEAV
GGYDLVFAFE CVHDMADPVA VLDAARRLLT AGGSMIVMDE RCAESFHAPA GEIERLLYGY
SLIGCLPDGM SRQPSVGTGT VMRPATLAGY AELAGFTSTE TLPIEHDFFR FYRLVP