| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6547 |
|---|
| Symbol | |
|---|
| ID | 5674862 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 7962932 |
|---|
| End bp | 7964074 |
|---|
| Gene Length | 1143 bp |
|---|
| Protein Length | 380 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641245396 |
|---|
| Product | amidohydrolase 2 |
|---|
| Protein accession | YP_001510790 |
|---|
| Protein GI | 158318282 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2159] Predicted metal-dependent hydrolase of the TIM-barrel fold |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.143744 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGTCC GACTCGCCCG CACAGCGGTC CTGGCGATGC TGCGCGCGGG AACAGCAGAC
CCCCGGCTCT CCCGCTGGCA GCCGCGGCCG GAGCTGCGGG TACCGGCGAC AACGGTGGGC
CGCGCCCGCT GGCCGGCGGT GGACGCGCAC AACCATCTGG GCCGCTGGCT ATGCCGGGAC
GGCGGATGGA TGGTTCCGGA CGTGGGCGCC TTCCTGGCGC TGATGGACGA GCTGAACATC
ATGACAGTGG TGAACCTGGA CGGCCGGTGG GGCGCCGAGC TGGCGGCTAA CCTGGATCGG
TACGACCGGG CGCACCCGGG TCGGTTCCTC ACCTACTGCC ATCTGGACTG GTCCCTGCTG
CGATCGCGGC GGCCCAGCGC GGCACTGGTG GCATCGCTGC GCACGTCCGC GGACGCCGGC
GCGCGCGGGC TGAAGATCTG GAAGGACCTG GGGTTGCGGG TACGAGACGC CCGTGGGCGA
CGGGTGCTGC CGGACGACCC TCGGCTGTCG GAGATGTTCG ACGTCGCAGG GGAGCTTGGC
CTGCCGGTGA TGATCCACGT CGGTGACCCG GTGGCCTTCT TCCGCCGTCC GGACCGGCAC
AATGAACGTC TCGACGAGCT GCGGCGGCAT CCCACCGCTG CGCGTGCCGG CGTTTCCCGC
AGATTCCCGG GCTGCGGCGG GCCGGGCCTG CCCCGGCTGG TCGAGGCGTT GGAGTCGACG
GTGGCCGCAC ACCCGCGCAC CACGTTCGTG GCCGCCCACG TCGGCTGCCT TGCGGAGGAT
CTCGGGCGGG TCGAACGGAT GCTCGACGCC CACCCGAACC TGGTGGTGGA CATCTCCGCC
CGGCTCGCCG AGCTTGGCCG GCAGCCGCGG GTCGCCAACC GGTTCATCAC CCGTTTCGCG
GATCGGGTGT TGTTCGGGAC GGACGCGTTC CCACCATCCG CCGATGGCTT CCGCGGGTAC
TTCCGACTGC TCGAGACCGA CGACGACCAC TTCCCCTACT CGGCGGAATG GCCGCCGCCG
CAGGGCCGGT GGGCCGTCTA CGGCCTGGGC CTCGAGCCCG ACGTATTGCG CCGGGTGTAC
GGGACCAATG CGGCCCGGCT TCTCCCGGGG GTGCCCGATC CAGAGCACGC TGTCCACGTC
TAA
|
|---|
| Protein sequence | MTVRLARTAV LAMLRAGTAD PRLSRWQPRP ELRVPATTVG RARWPAVDAH NHLGRWLCRD
GGWMVPDVGA FLALMDELNI MTVVNLDGRW GAELAANLDR YDRAHPGRFL TYCHLDWSLL
RSRRPSAALV ASLRTSADAG ARGLKIWKDL GLRVRDARGR RVLPDDPRLS EMFDVAGELG
LPVMIHVGDP VAFFRRPDRH NERLDELRRH PTAARAGVSR RFPGCGGPGL PRLVEALEST
VAAHPRTTFV AAHVGCLAED LGRVERMLDA HPNLVVDISA RLAELGRQPR VANRFITRFA
DRVLFGTDAF PPSADGFRGY FRLLETDDDH FPYSAEWPPP QGRWAVYGLG LEPDVLRRVY
GTNAARLLPG VPDPEHAVHV
|
|---|
| |