Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_6519 |
Symbol | |
ID | 5674834 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 7927452 |
End bp | 7927931 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641245367 |
Product | NUDIX hydrolase |
Protein accession | YP_001510762 |
Protein GI | 158318254 |
COG category | [L] Replication, recombination and repair [R] General function prediction only |
COG ID | [COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.170326 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.052102 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGTCC TCCGCCGTGC CGCCCGGGTC ATCCTGTTCG ATCCCGCCGA CGCCTTCCTG CTCATCCGGT CGCACGATCC GGATCTTCCC GACGGGCCCA CCTGGTGGCA TGTACCAGGC GGTGGCCTCG ATCCGGGGGA GGAGCCGGCG CAGGCCGGGG TGCGGGAGAT CCGGGAGGAG GTCGGGGTGA CCGTCGCCGA CCTCGGGCCC TGCGTCGCCA CCCGGACGGC CTATTTCACC TTCCTCGGCG TGGACTACCG GCAGGAGGAG TCCTTCTTCG TGGCGCGCCT GCCGAACCGG GTCGACGTGG ACGACGCGGC GTGGAGCGAC GTGGAGCGCC GGGCCACTCT CGGCTGGCGT TGGTGGACCC TCCCGGAGCT GGGATCCACC CCCGACACGG TCTACCCGCC CGCCCTGGCC CCCTTCCTCA CCTCCTGGCT CACCGCCGGC CCTCCCGAGA CCCCCTACTC CCTCACCTGA
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Protein sequence | MPVLRRAARV ILFDPADAFL LIRSHDPDLP DGPTWWHVPG GGLDPGEEPA QAGVREIREE VGVTVADLGP CVATRTAYFT FLGVDYRQEE SFFVARLPNR VDVDDAAWSD VERRATLGWR WWTLPELGST PDTVYPPALA PFLTSWLTAG PPETPYSLT
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