Gene Franean1_6512 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6512 
Symbol 
ID5674827 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7920834 
End bp7921337 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content76% 
IMG OID641245360 
ProductNUDIX hydrolase 
Protein accessionYP_001510755 
Protein GI158318247 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.877846 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0950137 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGGGCG TGGAGACTCC CGGCGCCTCA TCTGCCCGGG CCTGGCGGAA CAGCCTGCCC 
CGTAAGCGGA TGGCGGCCGG GGTGCTGTTC GTCGACGGCG CCGGCCGCGT CCTGCTGGTG
TGCCCGACAT ACCGGCCCGG ATGGGATCTG CCGGGCGGTG TGGTCGAGGC GGACGAGGCA
CCCCTGGTGG CGGCCCGCCG CGAGCTCGCC GAGGAGCTGG GCCTGGACCG CGCCCTCGGG
CGGTTACTGG CCGTCGACTG GGTACCGCCC GGGCCGGAGC GCACCGAGGG TCTGATCGTG
GTGTTCGACG GCGGCGTGCT GACACCGGAC GAGGCGGCCG GCATCCGACT GCCGGCCGAC
GAGCTCGCCG CCTGGTCGTT CGTGACGGCG GACGAGCTGC CCGGCCTCAT GGCACCGCTG
CTGGCGCGGC GGGTGGCCGC CTGCCTGACA GCGCGCGCCG GCGGCGCGAC GATCTACCTC
GAGGACGGCG CGCCGCCGAA CTGA
 
Protein sequence
MAGVETPGAS SARAWRNSLP RKRMAAGVLF VDGAGRVLLV CPTYRPGWDL PGGVVEADEA 
PLVAARRELA EELGLDRALG RLLAVDWVPP GPERTEGLIV VFDGGVLTPD EAAGIRLPAD
ELAAWSFVTA DELPGLMAPL LARRVAACLT ARAGGATIYL EDGAPPN