Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_6512 |
Symbol | |
ID | 5674827 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 7920834 |
End bp | 7921337 |
Gene Length | 504 bp |
Protein Length | 167 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 641245360 |
Product | NUDIX hydrolase |
Protein accession | YP_001510755 |
Protein GI | 158318247 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1051] ADP-ribose pyrophosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.877846 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0950137 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCGGGCG TGGAGACTCC CGGCGCCTCA TCTGCCCGGG CCTGGCGGAA CAGCCTGCCC CGTAAGCGGA TGGCGGCCGG GGTGCTGTTC GTCGACGGCG CCGGCCGCGT CCTGCTGGTG TGCCCGACAT ACCGGCCCGG ATGGGATCTG CCGGGCGGTG TGGTCGAGGC GGACGAGGCA CCCCTGGTGG CGGCCCGCCG CGAGCTCGCC GAGGAGCTGG GCCTGGACCG CGCCCTCGGG CGGTTACTGG CCGTCGACTG GGTACCGCCC GGGCCGGAGC GCACCGAGGG TCTGATCGTG GTGTTCGACG GCGGCGTGCT GACACCGGAC GAGGCGGCCG GCATCCGACT GCCGGCCGAC GAGCTCGCCG CCTGGTCGTT CGTGACGGCG GACGAGCTGC CCGGCCTCAT GGCACCGCTG CTGGCGCGGC GGGTGGCCGC CTGCCTGACA GCGCGCGCCG GCGGCGCGAC GATCTACCTC GAGGACGGCG CGCCGCCGAA CTGA
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Protein sequence | MAGVETPGAS SARAWRNSLP RKRMAAGVLF VDGAGRVLLV CPTYRPGWDL PGGVVEADEA PLVAARRELA EELGLDRALG RLLAVDWVPP GPERTEGLIV VFDGGVLTPD EAAGIRLPAD ELAAWSFVTA DELPGLMAPL LARRVAACLT ARAGGATIYL EDGAPPN
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