Gene Franean1_6510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6510 
Symbol 
ID5674825 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7918600 
End bp7920141 
Gene Length1542 bp 
Protein Length513 aa 
Translation table11 
GC content75% 
IMG OID641245358 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001510753 
Protein GI158318245 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.12601 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGTGACC GGGCGACCCG ACTGACCGCG GCACGCGGCC TGTGGAACCG CCTGGAGGTC 
ATCGCGGGAC TCGAGGGCTT CCCCCGTTAC CCGGGCAGCG CGCTGATCGC GCGGATTCCC
GCCGGACCGG CCCGCCGAGC CGGGACCGCG GTGGCCGGTG ACGTCCTGCC CACCGCCGTC
GTCGGCCTGA TCCTGCTGGT CGGGTCGACG AACGCTTCGA AGGACCAGAT CCCGCCCGGG
CACGCCCTGG ACGGGGTCGC CTACCTGCTC CTGGCGCTGG CGGTGGCCGT CTTCCCGTTG
CGCAGGTACG CCCCGCGGGT CCTGCTCGCC GCCGAGACCC TGATCATCGG CAGTTACACC
GCCATCGGCT ATCCGCACGG GCCGGCGACG CTCGCGGTCG CCGCGGCCGC CTTCACCGTG
GGCGTGCGGG TGCCCGCACG GGTGACCGGC CGCGCGGCGA AGATGTGCGC GGCGGTGCTG
CTGCTCGCCA GCATGGCGTC GTTCTCCCGC GGCTACCTCG ACAGCAGGTG GGATCTCGTC
TACACCTGCC TCGGTGTCCT CTGCGTGGCC TTCATTCCGG CTTTGCTGGG CGCGCTGCTG
CGGCTGAGCC GGCTGTCCTC GGCGCGGGCG GAGGAGGAGG CCACCCGGCG GCGGATCGAG
CAGGAGCGGC TGCGGATGGC CCGCGAGGTC CACGACGTCG TCGGCCACGG GCTCTCGATC
ATCTCGCTCC AGGCAGCGGT GGCTCTGCAT GTGCTCGACC GGCGGCCGGA GCAGGCGCAG
ATCGCGCTGG AGGCGATCCG CCGCACCAGC GTGGACGCAC TGGACGAGCT GCGGGCGACC
CTCGCCCTCA CCCGCGCCCG CGACGCCCGG TCCAGAGCCG GGAACGCCCG GGAAGCGGAA
AGCACCGTGC TCGCCGGGAA CACCATGCTC TGCGGGAACA CCGCGCTCGC CGGGAACACC
GCGCGTCCAG CGCACCCCGG AGGCGACAGA AGCGCCGAGC ACTTTGGAAG CCGGGCCGGA
GGCGCGGAGC GCGCCGGGCG CGGCGAGGGC ACCGGGCGCG GCGAGGGCGC GGCGGGCACC
GATCCCGGTG AGGCGCTCCG GACGCCGTTG ACCGGGCTGA GCCGGCTGCC GGGGCTGGTC
TCCGAGGTCC GGCTGTGCGG CATCGCCGTG GAACTGGTGA CCGATGGTGA TCTTGCCGGC
CTGCCCGCCG AGGTCGATCT CGCCGCCTAC CGGATCGTCC AGGAGTCGCT GACGAACGTG
CTGCGGCACG CCGGACCGGC CCGGGCCCGG GTCACCCTCC GCTCCACCGC GGACCACCTG
GAGGTCGAGA TCGTCGACGA GCCCACCGAG CGCAGCGCCG ACCTGCCCGC CGACGGTGAC
CCGCTCGTCC GCTCGACCGG GCACGGGCTG CGCGGCCTGC GTGAACGCGT GGACGAGCTC
GGCGGGTCCC TGACGGCGGG CCCGCGTCCG CAGGGAGGAT GGAGCGTGCG CACCGACCTG
CCCACGCCGG CCGTGTCCCG CCGCTCCGGA GGGGCCCGGT GA
 
Protein sequence
MRDRATRLTA ARGLWNRLEV IAGLEGFPRY PGSALIARIP AGPARRAGTA VAGDVLPTAV 
VGLILLVGST NASKDQIPPG HALDGVAYLL LALAVAVFPL RRYAPRVLLA AETLIIGSYT
AIGYPHGPAT LAVAAAAFTV GVRVPARVTG RAAKMCAAVL LLASMASFSR GYLDSRWDLV
YTCLGVLCVA FIPALLGALL RLSRLSSARA EEEATRRRIE QERLRMAREV HDVVGHGLSI
ISLQAAVALH VLDRRPEQAQ IALEAIRRTS VDALDELRAT LALTRARDAR SRAGNAREAE
STVLAGNTML CGNTALAGNT ARPAHPGGDR SAEHFGSRAG GAERAGRGEG TGRGEGAAGT
DPGEALRTPL TGLSRLPGLV SEVRLCGIAV ELVTDGDLAG LPAEVDLAAY RIVQESLTNV
LRHAGPARAR VTLRSTADHL EVEIVDEPTE RSADLPADGD PLVRSTGHGL RGLRERVDEL
GGSLTAGPRP QGGWSVRTDL PTPAVSRRSG GAR