| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6504 |
|---|
| Symbol | |
|---|
| ID | 5674819 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 7911930 |
|---|
| End bp | 7912655 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 641245352 |
|---|
| Product | thymidylate kinase |
|---|
| Protein accession | YP_001510747 |
|---|
| Protein GI | 158318239 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0125] Thymidylate kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0480023 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.117092 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAGCA CCGGGACTGA CCAGCATGAC CAGCACCTCG GCCACCCCTG CGACCTCGGC
GTGGCCGGCA CCGGGCGGGC GGGCGGCCCG ATGATCGTGG CGATCGAGGG GGTCGACGGC
GCGGGCAAGA ACACACTGAC GTCCCGGCTG GTCGAGGCGG TGACCGCGAC CGGGCGCACC
GCCGGCACCT TCGCCTTCCC GCGCTATGCC GCGGGCCCGC TGGGCACGGC GGTGCGGGCG
ATGCTCGACG GCGACGAACG GCTTGCCGGC CTGGCCGGTT CGGCCCGCGC GACCGCGCTG
CTGTTCGCGC TCGACCGGGC GAACGCCCTG CCCGAGCTGG CGAGGTGCGT GGCCGCGTAC
GACGTGCTGA TCGTGGACCG CTACCTCGGC TCGAACGCGG CCTACGGAGC AGCCCGGCTG
CCCGCCCCCG AGCGCGCCGA GTTCCTCGAC TGGATCGCCG AACTCGAGCT GACGCGGCTG
GGCCTGCCCC GGCCCGACCT GCAGGTGCTG CTGGACGTCC CGGTGGAGAC GGCGCGGGCC
GGGGCGCGGG CCCGCGCGGC GGAGGATACC GCCCGGGCGT TGGACACCTT CGAGAGCGAC
GCGGGCCTGC AGGCGCGCTG CGCCGAGATC TACCTGTCGC TGGCCGCCGA CAGCTGGGTC
GCGCCCTGGC TGGTCGTCGA CCGCGAGTCG GGCGCTCCGA AGATCCTCAG CGCACTGTTC
GGCTGA
|
|---|
| Protein sequence | MTSTGTDQHD QHLGHPCDLG VAGTGRAGGP MIVAIEGVDG AGKNTLTSRL VEAVTATGRT
AGTFAFPRYA AGPLGTAVRA MLDGDERLAG LAGSARATAL LFALDRANAL PELARCVAAY
DVLIVDRYLG SNAAYGAARL PAPERAEFLD WIAELELTRL GLPRPDLQVL LDVPVETARA
GARARAAEDT ARALDTFESD AGLQARCAEI YLSLAADSWV APWLVVDRES GAPKILSALF
G
|
|---|
| |