Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_6471 |
Symbol | |
ID | 5674786 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 7866573 |
End bp | 7867244 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641245319 |
Product | lipase class 2 |
Protein accession | YP_001510714 |
Protein GI | 158318206 |
COG category | [R] General function prediction only |
COG ID | [COG1075] Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0409022 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAGAG CGGCCAGGAT CCTTGGCGCT CTCGCGGTCG CCGCCGCAGC TTTGCTGGGC ACGTCGACCG CCGCCTCCGC GGCGACACAT GAACCCGTCA TCTTCGTCTA CGGATTCAAC GGATCGACAT CCACCTGGAC CGACATGGTC GCCGACTTCC AGGCCAACGG CTGGTCGTCG TCCGACCTGG TCGTGTTCAC CTACGACTCG CACCAGTCGA ACGTGACGAC CGCGAACCAG CTGGCCGCCA GAATCTCCTC CGTGCGCAGC GCGACCGGCG CGGCCAAGGT GGACCTCGTC ACCCACTCCA TGGGCGCGCT GTCCTCGCGC TATTACCTCA AGAACCTCGG CGGGACGTCC GTCGTCGACG ACTTCGTGTC GCTGGGTGGC CCGAACCACG GGACCAGCAC CGCGACCCTG TGCGGATGGC TCTACACGGC CTGCTCGGAG ATGAGCCCGG GATCGTCCTT CCTGAACACC CTGAACTCCG GTGACGAGAC TCCGGGCGCG GTCAACTACG GTACGTGGTG GTCGTCCTGC GACGACACCA TCAACCCGGA TTCCAGCGTC TCCCTCTCGG GTGCCACGAA CACCGCCGCC GGTTGCCTCG GCCATTCCGA GCTGCACGAC GACAACACCG TGGCCAGTCA GGTCAGAGCC TTCATCGGTT GA
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Protein sequence | MSRAARILGA LAVAAAALLG TSTAASAATH EPVIFVYGFN GSTSTWTDMV ADFQANGWSS SDLVVFTYDS HQSNVTTANQ LAARISSVRS ATGAAKVDLV THSMGALSSR YYLKNLGGTS VVDDFVSLGG PNHGTSTATL CGWLYTACSE MSPGSSFLNT LNSGDETPGA VNYGTWWSSC DDTINPDSSV SLSGATNTAA GCLGHSELHD DNTVASQVRA FIG
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