Gene Franean1_6471 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6471 
Symbol 
ID5674786 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7866573 
End bp7867244 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content66% 
IMG OID641245319 
Productlipase class 2 
Protein accessionYP_001510714 
Protein GI158318206 
COG category[R] General function prediction only 
COG ID[COG1075] Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0409022 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAGAG CGGCCAGGAT CCTTGGCGCT CTCGCGGTCG CCGCCGCAGC TTTGCTGGGC 
ACGTCGACCG CCGCCTCCGC GGCGACACAT GAACCCGTCA TCTTCGTCTA CGGATTCAAC
GGATCGACAT CCACCTGGAC CGACATGGTC GCCGACTTCC AGGCCAACGG CTGGTCGTCG
TCCGACCTGG TCGTGTTCAC CTACGACTCG CACCAGTCGA ACGTGACGAC CGCGAACCAG
CTGGCCGCCA GAATCTCCTC CGTGCGCAGC GCGACCGGCG CGGCCAAGGT GGACCTCGTC
ACCCACTCCA TGGGCGCGCT GTCCTCGCGC TATTACCTCA AGAACCTCGG CGGGACGTCC
GTCGTCGACG ACTTCGTGTC GCTGGGTGGC CCGAACCACG GGACCAGCAC CGCGACCCTG
TGCGGATGGC TCTACACGGC CTGCTCGGAG ATGAGCCCGG GATCGTCCTT CCTGAACACC
CTGAACTCCG GTGACGAGAC TCCGGGCGCG GTCAACTACG GTACGTGGTG GTCGTCCTGC
GACGACACCA TCAACCCGGA TTCCAGCGTC TCCCTCTCGG GTGCCACGAA CACCGCCGCC
GGTTGCCTCG GCCATTCCGA GCTGCACGAC GACAACACCG TGGCCAGTCA GGTCAGAGCC
TTCATCGGTT GA
 
Protein sequence
MSRAARILGA LAVAAAALLG TSTAASAATH EPVIFVYGFN GSTSTWTDMV ADFQANGWSS 
SDLVVFTYDS HQSNVTTANQ LAARISSVRS ATGAAKVDLV THSMGALSSR YYLKNLGGTS
VVDDFVSLGG PNHGTSTATL CGWLYTACSE MSPGSSFLNT LNSGDETPGA VNYGTWWSSC
DDTINPDSSV SLSGATNTAA GCLGHSELHD DNTVASQVRA FIG