Gene Franean1_6457 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6457 
Symbol 
ID5674772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7851694 
End bp7852254 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content73% 
IMG OID641245305 
ProductOmpA/MotB domain-containing protein 
Protein accessionYP_001510700 
Protein GI158318192 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0174987 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTATCACG CGTTTCGCAC CGCCGGACGT GCCGCGTCCA GGCGACGTCG GCGGTCCGGG 
GTTCCGGCGT GCGCGGCACT CGCGCTCACC GCCGTCCTCG GTCTCGCCTC AGCTTGCTCA
AGTGACGCGG CCGCGTCCAG CTTCACCCCC GCGCCGCATG CCACAAGAGT GCCACCGTCG
GTCGCTCCGG ACCCGCTCCC GCCGCTGAGC AGCTTCATCA CCCAGGCGGA CGGCAGCCGG
GTCTCGACCG TCAGCGCGGA CTACCTCTTC GACGCCAACA GCGCCGACCT GCGGCCCGAG
GCCGCCACCG CGCTCGCCGG CACCGTCCCC CAGATCCGCG AGCACGACGG ACGCGTCCAG
GTCGTCGGGT ACAGCGACGG TCTCGGGACG ACGGAGCACA ACCTCGACCT CTCCCGCCGG
CGCGCGGTGG CCGTCCAGGC CTACCTGGTG AGTCAGGACA TCCCGGCCTC GCTGCTCGAG
GTCGAGGCCA AGGGCGAACA GGGCGCCACC GACGGGGTCG CGGACGCCAG CCGGCGCCGA
GTGGAGATCG TGCTGCGATG A
 
Protein sequence
MYHAFRTAGR AASRRRRRSG VPACAALALT AVLGLASACS SDAAASSFTP APHATRVPPS 
VAPDPLPPLS SFITQADGSR VSTVSADYLF DANSADLRPE AATALAGTVP QIREHDGRVQ
VVGYSDGLGT TEHNLDLSRR RAVAVQAYLV SQDIPASLLE VEAKGEQGAT DGVADASRRR
VEIVLR