| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6451 |
|---|
| Symbol | |
|---|
| ID | 5674766 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 7844589 |
|---|
| End bp | 7845725 |
|---|
| Gene Length | 1137 bp |
|---|
| Protein Length | 378 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641245299 |
|---|
| Product | filamentation induced by cAMP protein Fic |
|---|
| Protein accession | YP_001510694 |
|---|
| Protein GI | 158318186 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3177] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0184045 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTTATC CCACTCCGAC CCTCGGGCCC GCCGACGATC AGGTGCTCGG CGAGATCGAC
GGCCTGCGGG ATGCGCTGCG GCACCAGATC CAGACCACAT CGCCGAAATG GACTGACGGG
CTCCGGAAGT TCCTGACCGC CGATGCCGTC GCGGCCTCGA ACTCCATCGA GGGTTTCAAG
GTGTCCACGA TCGACGTCCA GGATCTGATG ACCGGCGAGC GGGATGTCGA AGTCTCGGAC
GAGAACCGCG AGGAGACTCT CGCCTATCAG CGGATGATGA CGTATATCCA GACGCTCCAC
GACGCCGAGG ACTTCAGCTA CAGCAAAGGG CTGCTCAACG CGCTGCACTG GATGCTGCAG
GGTCACCGGC ACACCGTGCG CAAGCCGGCC GGGCAGTGGC GCCGGGGCCC GGTCTACGTC
ACCGATGCCC GCGACCCCAG CATCGCGGCC TATACAGCCC CGGGCGCCGA GGGCGTCCCC
GCGCTGATGA ACGAGCTCAT CGGCTGGCTC AACGCCGCCG ACGGCGCCCA TCCACTGGTA
CGGGCAGCAA TGGCTCACCT GCACCTGGTG TCCATCCACC CCTGGGCTGA CGGGAACGGC
CGGATGTCCC GTTCGCTGCA GACGCTCATG ATCGCCCGCG AAGGTGTCCT GGCCCCGGAG
TTCTCGTCCG TCGAGGCGTG GCTCGGCCGG CCCGGTAACA CCTGGGAGTA CTACCGCGAG
CTCAGCGACC GGGGCGCGAC GTACCTTCCC GACCAGGACG TCTCCAGCTG GATCCGGTTC
AATCTGACCG CCTACCACCA GCAGGCCCAG ACCGTTCAGG GCCGGCTCGA CCGCTCCGGG
CGGGTATGGG GGGCGCTCGC GGAATTCACC GAGAGCACCG GTCTGGACGA GCGTGTGGTG
AGCGCCCTGC ACGATGTGGC CATGGCCGGG CGGGTCCGCC GCTCACGCTA CGAGCAGGCC
GAGAGCCTGA GCCTGCAGCA GGCGCAACGC GACCTGCGCG ACCTCACGAC CGCCCAGCTC
CTGGAACCGG TCGGCCGAAC CCGGGCCCGC TACTACACGG CCGGCACCCG CTTCCCTCAG
CCGGCACTCG ACCTCGCACG CAAACCCATG ACGCTGCGTA ATCCCTACTC CGGCTGA
|
|---|
| Protein sequence | MLYPTPTLGP ADDQVLGEID GLRDALRHQI QTTSPKWTDG LRKFLTADAV AASNSIEGFK
VSTIDVQDLM TGERDVEVSD ENREETLAYQ RMMTYIQTLH DAEDFSYSKG LLNALHWMLQ
GHRHTVRKPA GQWRRGPVYV TDARDPSIAA YTAPGAEGVP ALMNELIGWL NAADGAHPLV
RAAMAHLHLV SIHPWADGNG RMSRSLQTLM IAREGVLAPE FSSVEAWLGR PGNTWEYYRE
LSDRGATYLP DQDVSSWIRF NLTAYHQQAQ TVQGRLDRSG RVWGALAEFT ESTGLDERVV
SALHDVAMAG RVRRSRYEQA ESLSLQQAQR DLRDLTTAQL LEPVGRTRAR YYTAGTRFPQ
PALDLARKPM TLRNPYSG
|
|---|
| |