Gene Franean1_6423 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6423 
Symbol 
ID5674738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7801163 
End bp7803577 
Gene Length2415 bp 
Protein Length804 aa 
Translation table11 
GC content73% 
IMG OID641245271 
Productputative phosphate-binding protein of phosphate ABC transporter 
Protein accessionYP_001510666 
Protein GI158318158 
COG category[O] Posttranslational modification, protein turnover, chaperones
[P] Inorganic ion transport and metabolism 
COG ID[COG0226] ABC-type phosphate transport system, periplasmic component
[COG0443] Molecular chaperone 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.81421 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.665559 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGGTATC AGCTCGGAAT CGATCTGGGT GTATCCGAAA CAACCGTCGC GGCCATCGAG 
GCGGGGTGGC CTGCCGTCGT TCCGATCGGC GGCTCCGCGT CCGTGCCGAC AATTCTGCAC
ATCGGCACGG ACGGGACGGC ACGCGGCGGC CGGATAGCCG CCCGGCTGGC CCGGAGGGAT
CCGGACCGGC ACGCGGCGCG TTTCGTCGAA CGGTTGGGAG AACCGGCGCC GATCCTCGTC
GGCGGCGTCG GGTACAGCGC GTCCTCGCTG GTCGCGCGCT ATCTCTCCTG GCTGGTGGAT
ACCGTCACCC GGATGCGCGG GGAGGCACCG GAGCTGGTCG TCGTGACCGC CCCCGGCAGC
TGGCCGGACC GGCGGCGGGA GGGGCTGGCC GACGCTCTGG CCCGCGTCGA GGCCGACGTC
GCAATCACCG CGCGACCGTC CGCCGACGCG CTCGGCGCGC TGCTGACCCG CTCGGGCCGC
GCGGCCCCCG GGCGCTACGT CGCCACGTTC GACCTGGGCT CGGACTGGTT CGAGGCCGCC
ATCCACACGG CGATGCCGTC CGGGTTCGTC GTCGCGGGCG GCCCGGTGGG CCTCTCCGAC
GTGACCACCG CCATGCTCGA CGAGCTGCTG CGGGCGCACG TCGTCGCGGC GCTCCCCGCC
GACGCCCCGG CGGCCGCGCT GTCGGCGTCG GCGCCGCTGC TGGCGGCCTG TGCCGTGGCA
CGCGAGGACC TGGTGGACGA CGAGACGGCG ACCATCGAGG TCGCCACCGG CGAGGCCGGT
GACGGCACCG GCACCGGCGA AGGCGGCACC GGCGGGAACA GCACCAGCGT CACCGTCAGC
AGGGAGGAGT ACGAGAACCT CGTCCGGCCG ATGATCGAGG ACGCCGCGCG CGCCCTTGCC
CGCGCCATCC GGTCCGTGCC GGCCATGCCC GAAGACGTGT CTCTTCTGGT GCTCCGGGGG
CCGGGGGCCC GGCTCCCGCT CGTCGGCAAG GTGCTCGGCG AGTCACTCGG CGGAATCGGG
CGGCACGAGA CCCACCCGGA CTCCGACCTC GCGCTCGGCG CGGCGCTGCT GGCGGCGGCG
GCGAACCCGA CCGAGCCGGC CAGCTCGCAG ACGGTGGTGC TCGGCCCGGC GGCGTACACG
ACGACGCCGC CACCGAGCAT CCCGCCGGCG AGCAGGCCGC CCGCGGTCGG CTCACCCGCG
GTCAGCTCAC CGACGGTCAG CTCACCGGCG GACGTCCCGC CGGGGGCTGT CCTGACCGGC
GTCGAGACCC AGGCGGTCGA TCCGGTCGAG CCGGCCCCGC CGGTCACGAC GTGCCGGGCC
CGGCACGACT CGGCGCGGAA GATTACCGCC GCCGCGGCCG CGCTCGCCGT GTTCGTCGCG
GGCAGCGTGA CCCTCGGCCT GGTGCTCGCC GACGATGACG GCGACTCCGC GGCCATCACG
GCGGCCGACA CCGGGCCGCT GCCGCCGTCC ACCATCGATC AGCACCCGCA GTTCCCGGCG
GACATGATGC GCTCCGCCGA GAAGGCCGCC GGCATCACCG CCGGGAACGC CGCTCCGGCG
ACGACAGCTC CCGACGGGCC GGAGACGGTG ATCGCGACGG GGTCGGCCGA GGTCGCGCCG
ATCACCGGCA CCGCCTACGC GATGTTCCGC GAGGCGCAGA AGGGGGTCAC CGTCCGGGTC
AGCGCGACCG ACACCGACGA CGGGTTCGCC AGGCTGTGCG CCGGTGACGC CGACATCGCC
GGCGCGTCGT TCGCGCTCAC CGACCCGGCC TGCAAGGACA AGGTGGTCGG GTTCGAGATC
GCGCACCACC TGCTGCCGAT CGTGGTGCCG AAGACCAACA CCTGGGTGAA GTGCCTGACC
ACCGCGCAGA TCGGCGCGAT GTGGAAACGG GACTCCACCG TCACGAGCTG GAACCAGATC
GACCCGTCGT TCCCGGCCGA GCCGGTGCGG CTGGTGGGCC CGGCGCCCGG GACCGTGCAC
GCGAAGGTCT TCCTGGCCAG CATGACCGGC GCCTCGGACA ACACCCGTAA GTACCGCGAG
GTCGAGCTGG ACGAGGTCCC GGAGGAGGTC GAGTACGACC GCGGCGCGAT CGGGTTTATG
GACTACTCGA ACTTCCAGAC CGCGGGCGGG GACGTCCGCG CGATCCAGCT CGACGCGGGC
CGTGGGTGCG TCGAGCCGAA CGCGCTGACG GCGGGCACCG GGATGTACAT GCCGCTGTGC
AAGCCGCTGT ATGTCTACGC GAGCAAGGAG TCGCTGCGGC GGCCCGCGGT CGCGGCCTTC
ATGAACTACT ACATGGAGAA CCAGAAGGAC GTGACGTTCC GGGCGCACTT CGTCGCCCGG
GACGACGCCA CGGTCAGGGA CAACACGGCG ATCGTCCATG CCATGACGTC CGGAGTGGAA
CCCGTCCGGA CATAG
 
Protein sequence
MGYQLGIDLG VSETTVAAIE AGWPAVVPIG GSASVPTILH IGTDGTARGG RIAARLARRD 
PDRHAARFVE RLGEPAPILV GGVGYSASSL VARYLSWLVD TVTRMRGEAP ELVVVTAPGS
WPDRRREGLA DALARVEADV AITARPSADA LGALLTRSGR AAPGRYVATF DLGSDWFEAA
IHTAMPSGFV VAGGPVGLSD VTTAMLDELL RAHVVAALPA DAPAAALSAS APLLAACAVA
REDLVDDETA TIEVATGEAG DGTGTGEGGT GGNSTSVTVS REEYENLVRP MIEDAARALA
RAIRSVPAMP EDVSLLVLRG PGARLPLVGK VLGESLGGIG RHETHPDSDL ALGAALLAAA
ANPTEPASSQ TVVLGPAAYT TTPPPSIPPA SRPPAVGSPA VSSPTVSSPA DVPPGAVLTG
VETQAVDPVE PAPPVTTCRA RHDSARKITA AAAALAVFVA GSVTLGLVLA DDDGDSAAIT
AADTGPLPPS TIDQHPQFPA DMMRSAEKAA GITAGNAAPA TTAPDGPETV IATGSAEVAP
ITGTAYAMFR EAQKGVTVRV SATDTDDGFA RLCAGDADIA GASFALTDPA CKDKVVGFEI
AHHLLPIVVP KTNTWVKCLT TAQIGAMWKR DSTVTSWNQI DPSFPAEPVR LVGPAPGTVH
AKVFLASMTG ASDNTRKYRE VELDEVPEEV EYDRGAIGFM DYSNFQTAGG DVRAIQLDAG
RGCVEPNALT AGTGMYMPLC KPLYVYASKE SLRRPAVAAF MNYYMENQKD VTFRAHFVAR
DDATVRDNTA IVHAMTSGVE PVRT