Gene Franean1_6384 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6384 
Symbol 
ID5674700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7751655 
End bp7752125 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content72% 
IMG OID641245233 
Productthioesterase superfamily protein 
Protein accessionYP_001510628 
Protein GI158318120 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0187489 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.20607 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGCGA CGCACGACCC CGCGAGGACA CAGCTGGCGA ACTACCCGTT CGTCATGACG 
CTGCAACCCC GCTTCGGCGA CATGGACAGC CTCGGGCACG TGAACAACGT GGCCATCGCG
GCGCTCTTCG AGGAGGCCCG GGTCGGGATG AACCGGGCGA TGCTCGGCGA CAGCCATGTG
GCGCCGGCGC TGAGCCGCCC GCTACCGGTG GTCGCGGCCC GCGTGGAGAT CGACTATCTG
GGCGAGGTCC GCTACCCCGG GGAGTACCAC GTCGGCGTGG GCGTCGGCAG GGTCGGCACC
AGCTCCGTCC TGCAGGTGTG CGCGATGTTC GACGGCGAGA CCTGTGTCGC GCTGTGCGAC
GCCGTGCTGG TGCACCGCCC GGCCACCGGG CCGGCGCCGG TACCGCAGGA GGTGCGCGAG
CTCCTGACGA CGGTCATGGC CTTTCCCACC CGGGTCGACG CCGGGGTCTG A
 
Protein sequence
MGATHDPART QLANYPFVMT LQPRFGDMDS LGHVNNVAIA ALFEEARVGM NRAMLGDSHV 
APALSRPLPV VAARVEIDYL GEVRYPGEYH VGVGVGRVGT SSVLQVCAMF DGETCVALCD
AVLVHRPATG PAPVPQEVRE LLTTVMAFPT RVDAGV