| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6354 |
|---|
| Symbol | |
|---|
| ID | 5674670 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 7713895 |
|---|
| End bp | 7714647 |
|---|
| Gene Length | 753 bp |
|---|
| Protein Length | 250 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641245203 |
|---|
| Product | putative ABC transporter integral membrane subunit |
|---|
| Protein accession | YP_001510598 |
|---|
| Protein GI | 158318090 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTTGC GACCGGTGCT GTACTCGGAG TGGACCAAGA TCAGGTCTCT CCGTTCCCTC
GTCTGGTCGC TGGCACTGGC CGCCGTCATG CTCGTCGGCT TCGGTGCCCT CGTCTGCGGA
GCCTACGGCG ACGCCGAGGC CGCCGAAGCG GACTACGATC CGCTGGCGGT GGGCTTCTGG
AGCCTGAACT TCGCCCAGAT CGCGCTGGCT GTCTTCGCGA TGCTGTCCCT CGGCGGCGAG
TACGAGAAGG GCACAATCAC CACCTCGCTC ACCGCCGTTC CCCAGCGGAC CCTCTTCTAC
CTGGGCAAGC TCCTGGTCGC TGCTGGCCTG TCACTGGCGG TTGCCCTCCT GGCAGCACCG
CTGACGTTCT TCCTGACCCA GGGTCTGCTG GACGAGCACG GGGTGTCCCT CCGCGATGCC
GGCGCAGCGC GCGGCGTGAT TTCTCTGATT CTCTACTTTC CGCTGCTGAC TCTTCTGTGC
ATGGGCCTCG CCGCGATGAC CCGTTCCGTG GCTGCGACGT TGGGCCTGTT CCTGCCGTTC
CTCTTCCTGC TCTCCCCACT GAGCATGGAG GTTCCCGGCC TGTGGACTAT CACCCAGTTC
CTGCCCGACC GGGCTGGGCT GTACGCGGTC ATGAACCTCC AGCCGGACCC CGACGTCCTT
TACAACCCGC GGCTTGGCCT GTCCATCATG GCTGTCTGGG CGGCGGTCGC GGTCTTCGGT
GGCTGGCGTG CCCTGCGCAG CCGTGACACG TGA
|
|---|
| Protein sequence | MSLRPVLYSE WTKIRSLRSL VWSLALAAVM LVGFGALVCG AYGDAEAAEA DYDPLAVGFW
SLNFAQIALA VFAMLSLGGE YEKGTITTSL TAVPQRTLFY LGKLLVAAGL SLAVALLAAP
LTFFLTQGLL DEHGVSLRDA GAARGVISLI LYFPLLTLLC MGLAAMTRSV AATLGLFLPF
LFLLSPLSME VPGLWTITQF LPDRAGLYAV MNLQPDPDVL YNPRLGLSIM AVWAAVAVFG
GWRALRSRDT
|
|---|
| |