| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6291 |
|---|
| Symbol | |
|---|
| ID | 5674610 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 7640453 |
|---|
| End bp | 7640881 |
|---|
| Gene Length | 429 bp |
|---|
| Protein Length | 142 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641245143 |
|---|
| Product | protein tyrosine phosphatase |
|---|
| Protein accession | YP_001510539 |
|---|
| Protein GI | 158318031 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0394] Protein-tyrosine-phosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCGCCA CACCGGATCG GCTGCTGGTG GTCTGCCTGG GTAACCACTG CCGGTCCCCG
CTCGCCGAAG CCGTCCTCAC CCAGAAGTCG GGTGGGGCCT TGGATGTGCG GTCCGCGGGG
ACGGCCGGGA AGTGGAGCAG ACGGCCCGCC CACGCCACGA TGACCGCAGT GGCCGCCCGG
CACGGCTACG ACCTGTCCGC CCATCGCGGC CAGCAGGTCA CCCCGGAGCT GCTGGCCTGG
GCCGATGCGG TCCTGGCCAT GGACGCCAAG AACCTCACCG ACCTCAAGCC CCTGACCATC
CAGACGTCGA CCACGGCCGT CCTATACCTG GGCGACCGGG ATGTTCCCGA CCCATGGGGC
GGGGACGAGG AGGCGTTCAC CGCCTGCTTG CGGATCATCG AGGCGGGCGC GGCCCGCCAC
CTGCCCTAA
|
|---|
| Protein sequence | MTATPDRLLV VCLGNHCRSP LAEAVLTQKS GGALDVRSAG TAGKWSRRPA HATMTAVAAR
HGYDLSAHRG QQVTPELLAW ADAVLAMDAK NLTDLKPLTI QTSTTAVLYL GDRDVPDPWG
GDEEAFTACL RIIEAGAARH LP
|
|---|
| |