Gene Franean1_6252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6252 
Symbol 
ID5674571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7592510 
End bp7593361 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content71% 
IMG OID641245104 
Producthypothetical protein 
Protein accessionYP_001510500 
Protein GI158317992 
COG category[S] Function unknown 
COG ID[COG1801] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATCTGC ACGTGGGGTG CGCGATGTGG ACCCACAAGT CCTGGCAGGG GCGCCTGCTG 
GCCCATCCGC TGCCGGCCCA CGAGCGCCTG CGGCACTACG CCGCCTGGTG TAACGCGGTC
GAGGGGAACA CCACGTTCTA TGCGACCCCG GCCCGGGAGA CCGTGGCCAC GTGGGCGCGG
CAGACCGACC CCGGCTTCCG GTTCGTGGTC AAGCTGCCGA AGGTCATCAC GCACGAACGC
CACCTCACCG ACGTCGACGA GGTGCTTCGC TCGTTCCTGA ACGCGATGGA GCCACTCGGC
CCGCGGGCGC ACGCCCTCTG GATTCAGCTG CCGGGGGCGT TCGGCCCGGC CGACGTGTCG
CTGCTCGCCC GCTTTCTGCG CCGGCTCGAC ACGTCCCACC GGTACGCGGT GGAGGTCCGC
CATCCGGCCT TCTTCGCCGA CCCGCGCGCG GCGCGCCTGC TCGAGGACGC ACTCGCCACC
GTGGGCGCCG AATGGATTCC GTTCGACACA ACCGAGTTCT TCCGCAGCCC GCCGACGAGC
GACGCCGAAC GGGACGCCTG GGCGAAGAAG CCCCGGATGC CGCTCCGGTC ACTCGCGCTG
ACCGACCAGC CGATCGTCCG CTACCTCGGC CGCGACGACT CCGCCCGGAC GGTCGAGGGC
TGGCGGCACT GGGTCGACAC CACCGTCACG TGGCTGCGCG AGGGACGATC GCCCACCGTC
TTCATCCACA CCCCGGACAA CGCCGACGCT CCGCTGCTCG CCCGCCGTTT CCACGACGAG
GTCCGGGCCC GCGTCCCCGA ACTCGGTCCT CTGCCGCAGC CGATACCAGC CGAGCCCCTG
ACCCTCTTCT GA
 
Protein sequence
MHLHVGCAMW THKSWQGRLL AHPLPAHERL RHYAAWCNAV EGNTTFYATP ARETVATWAR 
QTDPGFRFVV KLPKVITHER HLTDVDEVLR SFLNAMEPLG PRAHALWIQL PGAFGPADVS
LLARFLRRLD TSHRYAVEVR HPAFFADPRA ARLLEDALAT VGAEWIPFDT TEFFRSPPTS
DAERDAWAKK PRMPLRSLAL TDQPIVRYLG RDDSARTVEG WRHWVDTTVT WLREGRSPTV
FIHTPDNADA PLLARRFHDE VRARVPELGP LPQPIPAEPL TLF