| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6241 |
|---|
| Symbol | |
|---|
| ID | 5674560 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 7578618 |
|---|
| End bp | 7579130 |
|---|
| Gene Length | 513 bp |
|---|
| Protein Length | 170 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641245093 |
|---|
| Product | flavin reductase domain-containing protein |
|---|
| Protein accession | YP_001510489 |
|---|
| Protein GI | 158317981 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGGCA CACGGCCCCC GAACCACACC GACGACCACA CGAACGCCTT CCGGAACGCG
CTTGGAACGT TCGCGACGGG AATCGTGGTC GTCACCGCGT CGCACCCGGC GGACGGTCCC
GTGGGTCTCA CGGCCAACTC GTTCAGCTCG GTGTCGCTCG CTCCTCCGCT CGTGCTGTTC
TGCGTGGCGC ACACCTCCAC CACGTGGCCG TCTATCCGGG CCGTGGGCCG GTTCTGCGTG
AACGTCCTCG CCGACGGCCA GGAGGAACTG TCACGCCGGT TCACCGTGCG GGGTGAGGAT
CGCTTCCGCG GCGTCCCCTG GCGGCCCGCG CCGTCCGGCG CCCCGATCCT GCCCGGCGTC
GCGTCATGGA TCGACTGCCG CATCGAGACT CTCCACGAGG CCGGCGACCA CACCATCGTC
GTCGGGAAGG TCTGCGATCT CGCGGTCGAC GACAAGGGTG CTGCTCCGCT CCTCTACTAC
CGAAGCAGCT ACGCCAGCCT GACCGTCAGA TAA
|
|---|
| Protein sequence | MSGTRPPNHT DDHTNAFRNA LGTFATGIVV VTASHPADGP VGLTANSFSS VSLAPPLVLF
CVAHTSTTWP SIRAVGRFCV NVLADGQEEL SRRFTVRGED RFRGVPWRPA PSGAPILPGV
ASWIDCRIET LHEAGDHTIV VGKVCDLAVD DKGAAPLLYY RSSYASLTVR
|
|---|
| |