Gene Franean1_6203 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6203 
Symbol 
ID5674523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7537085 
End bp7537423 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content65% 
IMG OID641245055 
Productnitrogen regulatory protein P-II 
Protein accessionYP_001510452 
Protein GI158317944 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0347] Nitrogen regulatory protein PII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.296271 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0483191 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTCG TGACGGCAGT CATCAAGCCG TTCAAGGTGG ACGACGTCAA GACCGCCCTC 
GAGGGCATCG GCGTCCACGG GCTGACGATC TCCGAGGTGC AGGGCTACGG GCGGCAGAAG
GGCCACACCG AGGTCTACCG CGGGGCCGAG TACAAGGTCG ACTTCGTCCC CAAGATCAAG
ATCGAGGTGG TGGTGGACGA CGAGGCCGTC GACGAGCTCG TCACCGCGAT CACGACGTCC
GCGCAGACCG GCAAGATCGG CGACGGAAAA GTGTGGGTTG TCCCGGTCGA CGCTGTCGTC
CGTGTACGGA CGGGTGAGCG GGGCTCCGAC GCCCTGTAA
 
Protein sequence
MKLVTAVIKP FKVDDVKTAL EGIGVHGLTI SEVQGYGRQK GHTEVYRGAE YKVDFVPKIK 
IEVVVDDEAV DELVTAITTS AQTGKIGDGK VWVVPVDAVV RVRTGERGSD AL