| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6175 |
|---|
| Symbol | |
|---|
| ID | 5674496 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 7504804 |
|---|
| End bp | 7505643 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 641245027 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001510425 |
|---|
| Protein GI | 158317917 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.181485 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACCTGC GAGGTCACGG CAGATCGACC GGCACCTGCA CTTTCGGGGA CCGCGAAGTC
CTGGATGTCG ACGCGGCGGT AGGCGAGGCG CGACGGCTCG GCTACCGCGA AGTGGTCACT
ATGGGGTGGT CCATGGGTGG TGCCGCGGTG GTCCGGCACG CGGGGCTGGC AGCCGGCGGC
GAGCCGGTGC ACGGGCACCG GGTCCGGCAC CGTCCGGACG CGGTCGTCGC CGTCAGTGCC
GCGAGCCGGT GGTTCGTCCG CGACACGGCG CCGATGCGCC GCATCCACTG GTTCGCCGAG
ACGACGTCCG GACGAGCCGC GGCCCGAGTC GCCCTGGGCG TGCGCATCGC CGCGCAGCCA
TGGCGGGCGG TGCCGCCCTC GCCGGTCGAG CTCATCGGAC GGATCGCGCC GACGCCCGTC
CTGATCGTGC ACGGTGACCG TGACTCGTAC TTCACGCTCG AGCACCCGCG GGCGCTGGCC
GCCGCGGCCG GCCCGACCGG GCAGCTGTGG GTGGTCCCGG GATTCGGCCA CGCCGAGGCC
GCCGCCACCG CGGGCCTGCT CGACCGTATC GGCGCCCACC TGCCCGATCT GCTGGCCGGC
CGTCCCGAGT GGTCGGCGCG CGCGGGGCGC ATCGCCGGGG AGACGGCCGA GGGCCTGGGG
CCGGGTCTCG ACGCTGGCCG GGGGGTTGGC CGGGGCCCGG GAGGTGACAC GTCCCCAATA
CTGGGCGAAC CGTCGTCCGG AGTCCTGCGG CCACCGGTCG CGCGGCGGGG AGCGGCGGAG
GAGTGGCGTC GTTCCGGCCC TGGTCGAGGG AGCGGTCACG ACGCGGTTGA CGCGGATTGA
|
|---|
| Protein sequence | MDLRGHGRST GTCTFGDREV LDVDAAVGEA RRLGYREVVT MGWSMGGAAV VRHAGLAAGG
EPVHGHRVRH RPDAVVAVSA ASRWFVRDTA PMRRIHWFAE TTSGRAAARV ALGVRIAAQP
WRAVPPSPVE LIGRIAPTPV LIVHGDRDSY FTLEHPRALA AAAGPTGQLW VVPGFGHAEA
AATAGLLDRI GAHLPDLLAG RPEWSARAGR IAGETAEGLG PGLDAGRGVG RGPGGDTSPI
LGEPSSGVLR PPVARRGAAE EWRRSGPGRG SGHDAVDAD
|
|---|
| |