Gene Franean1_6116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6116 
Symbol 
ID5674437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7443367 
End bp7443786 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content72% 
IMG OID641244968 
Producthypothetical protein 
Protein accessionYP_001510366 
Protein GI158317858 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.550687 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.46326 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGGGTC TCGCGCTGAC ATTCCTGATC ATAGGTGTCT GGGTGTTTTC GGTCATAGAC 
GTGATCGGCA CTCCAGCGGA CGCGGTCAAG GTCGTGCCCA AACCGATCTG GCTGATCGTG
CTGATCGTCT TCTTCTTCCT CGGATCGGTC TGCTGGTTCC TGTTCGGGCG GCCACGCGCC
GCCCACGGCT ACGACGGCTA CGAGCGCCGC GCGGCCTCGG ACCACCCGGC GTTCGGCGGC
CGTGGGCCGT GGGGAACCGA GCGGCGCACC GCCGGCGGCC ACACCCGGTC CGGCGTCTCC
CGGACGGGGA TGCGCCGCCA GGCCGTCCGC CCCGTCGGCC CGGACGACGA CCCCGAGTTC
CTTCGCGAGC TCGCCGACCG CATCCGCGGC GGCGAGCCCG AGCCGCCCGC CCGCGGCTGA
 
Protein sequence
MLGLALTFLI IGVWVFSVID VIGTPADAVK VVPKPIWLIV LIVFFFLGSV CWFLFGRPRA 
AHGYDGYERR AASDHPAFGG RGPWGTERRT AGGHTRSGVS RTGMRRQAVR PVGPDDDPEF
LRELADRIRG GEPEPPARG