| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6106 |
|---|
| Symbol | |
|---|
| ID | 5674427 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 7433963 |
|---|
| End bp | 7434328 |
|---|
| Gene Length | 366 bp |
|---|
| Protein Length | 121 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641244958 |
|---|
| Product | response regulator receiver protein |
|---|
| Protein accession | YP_001510356 |
|---|
| Protein GI | 158317848 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4753] Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0846818 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATCGCGG ATGACGCCGA CGGGCTGCGC GAGCTCCTCT GCCTCCTGTT CGACACCGAG
CCGGACTTCA TCGTGGTCGG CCGGGCGACG AACGGGGCGG AGGCCGTCGA GGTCGTCACC
CAGACCGCGC CCGACCTCGT CCTGCTGGAT GTCGCGATGC CCGTGCTCGA CGGCATCGGC
GCCCTGCCGC ATGTGCGGAT GGCGGCGCCC GACGCGCGAG TGGTGATCTT CACCGGCTTC
TCCGAGAGCG CGCTGCGCGA CGAGGTCATG GCCCTCGGCG CGGACGAGCT GATGGAGAAG
GACCTGTCCA CCAGCGCGCT GCTCGACCGG CTCCGGCAGA TGTGCCGGCG CCCACGCCTC
GTCTGA
|
|---|
| Protein sequence | MIADDADGLR ELLCLLFDTE PDFIVVGRAT NGAEAVEVVT QTAPDLVLLD VAMPVLDGIG
ALPHVRMAAP DARVVIFTGF SESALRDEVM ALGADELMEK DLSTSALLDR LRQMCRRPRL
V
|
|---|
| |