Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_6088 |
Symbol | |
ID | 5674409 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 7410666 |
End bp | 7413257 |
Gene Length | 2592 bp |
Protein Length | 863 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 641244940 |
Product | NADH dehydrogenase subunit G |
Protein accession | YP_001510338 |
Protein GI | 158317830 |
COG category | [C] Energy production and conversion |
COG ID | [COG1034] NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) |
TIGRFAM ID | [TIGR01973] NADH-quinone oxidoreductase, chain G |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.012959 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGTCG CCCCAGAGAA GCCGGCCGCG CCGGCCGCCC CCAACCACGT CACGCTCACC GTGGACGGGC TCGAGGTGAG CGTGCCGAAG GGCACCCTCA TCATCCGGGC CGCTGAGCTG TTGGGAATCG AGATCCCGCG GTTCTGCGAC CACCCCCTGC TGGACCCGGT CGGCGCCTGC CGGCAGTGCA TCGTCGAGGT CGAGGGCCAG CGCAAGCCGG TCGCGTCCTG CACGACCACG GTCGCCGCCG ACATGGTCGT CAGGACCCAG GTCACCTCGC CGGTGGCGAA GAAGGCCCAG GCCGGGACGC TGGAGTTCCT GCTCCTCAAC CACCCCCTCG ACTGCCCGAT CTGCGACAAG GGCGGCGAGT GCCCGCTGCA GAACCAGTCG ATGGCCAACG GCGCGGCGAC CTCCCGCTTC AAGGAGACGA AGCGGGCGTA CCCGAAGCCG CTGGCGATCT CCAGCCAGAT CCTGCTGGAC CGGGAGCGTT GCGTGCTGTG CGCGCGCTGC ACCCGGTTCT CCGCGCAGAT CGCCGGGGAC CCGTTCATCG AGTTGTTCGA GCGGGGCGCG GCCGAGCAGG TCGCCGTCAG CGACGGGCAG CCGTTCTCGT CCTACTTCTC CGGCAACACC GTGCAGATCT GCCCGGTCGG TGCGCTCACC AGCGCCGCCT ACCGGTTCCG GGCCCGGCCG TTCGACCTGG TGTCGACGCC GACGTCCTGT GAGCACTGCG CCGCCGGCTG CTCGCTGCGC ACCGACCACC GGCGCGGCAA GGTGATGCGT CGCCTCGCCG CCGAGGATCC GGCGGTCAAC GAGGAGTGGA ACTGCGACAA GGGCCGCTTC GCGTTCAACT ACGCGCGCCA GTCCGACCGG CTCACCATGC CGCTGATCCG GGACGACAGC ACCGGCGAGC TGGTCGAGGC GAGCTGGTCG GAGGCGCTGG AGTACGCCGC CCGCGGCCTG GCCGAGTGCC GGGACCGCAA CGGCGTCGGC GTGCTCGCCG GCGGCCGGCT CACCCGCGAG GACGCCTACG CCTACGCCAA GTTCGCCCGG CTCGCCCTGG GCACCAACGA CGTGGACTTC CGCGCCCGCC CGCACTCCGC CGAGGAGGAG GCCTTCCTCG GCAGCGCCGT CGCCGGTACC GGAATCGGGG TCACCTACGC CGATCTGGAG GTCGCGCCCG CCGTCCTGCT CGTCTCGTTC GAGCCGGAGG AGGAGTCGCC CGTCGTCTTC CTGCGGCTGC GCAAGGCGGC GAGCAAGCAC GGAACCGCCG TGCACGCGCT GGCGCCGCTG ATCACCCGCG GGCTGCGCAA GATGGCCGGC ACGCTGATCC CGGTCGTCCC CGGCGGCGAG GCCGCCGCGC TGGACGAGCT GGCCACCGGC GCGTCGGCCA CCACCGAGGT GCTGCGGGCA CCCGGCGCGG TGATCCTGGT CGGCTCGCGG GCCGCCGAGT CGCCCGGCGC GCTGTCCGCG GCGCTGCGCC TCGCCGAGTC CACCGGCGCC GCGCTGGCCT GGGTGCCGCG CCGGGCCGGT GAGCGCGGCG CGGTCTCCGC CGGCCTGCTC CCGTCGCTGC TGCCGGGCGG CCGCCCGGTC GCGGACGTCG GTGCGCGGGC CGAGGTGGAG TCCTTCTGGG GCACCCGCCT GCTGGGCGCG CCCGGCCGCG ACACCGCCGG CATTCTGGCC GCAGCCGCGG CGGGCCGGCT TGACGCGGTC GTCGTCGCCG GTGTCGACGC CGAGGACCTG CCCGACCCCG CGGCCGCGCT GGCCGCGCTG GCCCGGGTGC CGTTCTGCGT CTCGCTGGAG ATCCGCCGCT CGTCGATCGC GGAGGTCGCC GACGTCGTCC TCCCGGTCGC TCCGGTGGCG GAGAAGGCCG GCACGTTCGT CGACTGGGAG GGCCGTCTGC GTCCCTTCCA GCGTGCACTG GAGGGGACGC CGGCCCTGCC CGACCTGCGG GTGCTGCACC TGCTCGCCGC CGAGATGGGC ATCGACCTCC GGGTTCCGGA CGCGGGCGCC GCCGCGCGCG AGTTGAGCGA GCTCGGCCGC GCCGGTGACG AGACCGGGCG CGGCCCGGCT CCGGTCGAGC GGGTGCCCGA GCCGGTGACC GCCGGTCCGG GCGAGGCCCT GCTGGCGACC TGGCACCTCA ACCTTGACGA CGGCGCCCTG CAGGCCGGCG AGCCGTACCT GGCCGGCACC GCCCGTCCAC CGCGGCTGCT GCTCTCGGCC GCGACCGCCG CCGAGATCGG CGCGGTCGAG GGGGAGCCGG TCACCGCCAG CACCTCCCGC GGCTCCGTCA CCCTGCCGCT GGGGATCACC CCCATGCCGG ACCGGGTCGT CTGGGTTCCG ACGCACTCAC CCGGGTCGCA CGTCCGCCGC TCGCTGGCCG AGCACGCCGG CGTGCTGGTT CGGCTCAGTG CCGGCGGGCT GCTGCCGACC GAGACGGCGC CCGGCGGGGA AGTCGACACC TTCCCGACCG ACGAGACCCG CGGCGCGGCG CTCGGCTCGC AGCTCGCGGC CGCCCAGGAC ACCGCCGTGA CCGTGGCCCA CACCGGCCTC GGTGCCGCGG GCCGGGTCGA CACCACCGGA GGCCGGGCAT GA
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Protein sequence | MTVAPEKPAA PAAPNHVTLT VDGLEVSVPK GTLIIRAAEL LGIEIPRFCD HPLLDPVGAC RQCIVEVEGQ RKPVASCTTT VAADMVVRTQ VTSPVAKKAQ AGTLEFLLLN HPLDCPICDK GGECPLQNQS MANGAATSRF KETKRAYPKP LAISSQILLD RERCVLCARC TRFSAQIAGD PFIELFERGA AEQVAVSDGQ PFSSYFSGNT VQICPVGALT SAAYRFRARP FDLVSTPTSC EHCAAGCSLR TDHRRGKVMR RLAAEDPAVN EEWNCDKGRF AFNYARQSDR LTMPLIRDDS TGELVEASWS EALEYAARGL AECRDRNGVG VLAGGRLTRE DAYAYAKFAR LALGTNDVDF RARPHSAEEE AFLGSAVAGT GIGVTYADLE VAPAVLLVSF EPEEESPVVF LRLRKAASKH GTAVHALAPL ITRGLRKMAG TLIPVVPGGE AAALDELATG ASATTEVLRA PGAVILVGSR AAESPGALSA ALRLAESTGA ALAWVPRRAG ERGAVSAGLL PSLLPGGRPV ADVGARAEVE SFWGTRLLGA PGRDTAGILA AAAAGRLDAV VVAGVDAEDL PDPAAALAAL ARVPFCVSLE IRRSSIAEVA DVVLPVAPVA EKAGTFVDWE GRLRPFQRAL EGTPALPDLR VLHLLAAEMG IDLRVPDAGA AARELSELGR AGDETGRGPA PVERVPEPVT AGPGEALLAT WHLNLDDGAL QAGEPYLAGT ARPPRLLLSA ATAAEIGAVE GEPVTASTSR GSVTLPLGIT PMPDRVVWVP THSPGSHVRR SLAEHAGVLV RLSAGGLLPT ETAPGGEVDT FPTDETRGAA LGSQLAAAQD TAVTVAHTGL GAAGRVDTTG GRA
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