| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6020 |
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| Symbol | truA |
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| ID | 5674341 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 7342901 |
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| End bp | 7343728 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 641244868 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_001510270 |
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| Protein GI | 158317762 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0748411 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.102476 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACCGG CCGAGGGACT GATCCGGCTG CGCCTGGACC TCGCCTACGA CGGCACGGCC
TTCGCCGGCT GGGCCCGCCA GCCCGGCCAG CGGACGGTCC AGGGTGACGT CGAGGACGCG
CTGATGCGGG TCGCGCGGCT GCCGGCCGTC CGGCTCACCG TCGCCGGGCG CACCGACTCC
GGCGTGCACG CCGCCGGCCA GGTGGCCCAC GTCGACATCC CAGACGACAC GCCGGTCGGT
GGGCTCGCCC GCAGGCTGAA CGGCGTGCTC GACCGCGCCG TCCGGGTGAA GGGCCTCGCG
CCCGCCCCGG ACGGGTTTGA CGCCCGCTTC TCCGCGCTGT CCCGCAGATA CGTCTACCGG
ATCACCGACG CCCCGTACGG GGCGGACCCG CTGCGCCGTT TCGACACCCT GGCGTCGCCG
CGGCCGCTGG ACGTCCCGGC GATGGCCGAG GCGGCGCTGC TGCTGCTCGG CGAGCATGAC
TTCGCCGCCT TCTGCCGGCG GCGCGAGGGC GCCACGACCG TCCGCACCCT GCTGCGCCTG
GACGTCTCCC GCTCCCGCGA CGTCATCCTC GCCGACGTCG AGGCGGACGC GTTCTGCCAC
TCCATGGTGC GTGCCCTGGC CGGCGCGCTG GTGGCGGTGG GGGAGGGCCG GCGCCGGCCG
GAGTGGGTGG CCGCCGTCCT GGGCCGGGGC ATGCGAGATC CCGCGGTGAC TGTACTTCCG
GCCCACGGGC TGACCCTGGT GGAGGTCCGC TACCCGCCGG ACGCCGCCCT CGCCGCGCGG
GCCCAGGTGA CCCGCGCGGT CCGCGTGCCG ACGACGCCGT CCGGCTAG
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| Protein sequence | MRPAEGLIRL RLDLAYDGTA FAGWARQPGQ RTVQGDVEDA LMRVARLPAV RLTVAGRTDS
GVHAAGQVAH VDIPDDTPVG GLARRLNGVL DRAVRVKGLA PAPDGFDARF SALSRRYVYR
ITDAPYGADP LRRFDTLASP RPLDVPAMAE AALLLLGEHD FAAFCRRREG ATTVRTLLRL
DVSRSRDVIL ADVEADAFCH SMVRALAGAL VAVGEGRRRP EWVAAVLGRG MRDPAVTVLP
AHGLTLVEVR YPPDAALAAR AQVTRAVRVP TTPSG
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