Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_5975 |
Symbol | |
ID | 5674296 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 7280858 |
End bp | 7281544 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 641244823 |
Product | hypothetical protein |
Protein accession | YP_001510225 |
Protein GI | 158317717 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.718615 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.151599 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGAGCA CGTCGAAGGC GCTGCGGGTC GAGGCGACCC GGCTGCGCGC CCTGGGCTGG ACATACCAGC GCATCGCCCT GGAGCTGCGC CTCCGCCATC GCCTCAACGC GCGCGTCGCG TACCGCCTGG CCCATGGCTG GACGCAGGAG GAGGTCGCTC GGCGCTGGAA CGAGCGCTGG CCCGGGCCGG GCGCGACCAA GACGGGCAAG ACGATCTCGT ACTGGGAGAT CTGGCCGGCC CGCGGCGGCC GAGCCCCCTC GGCGCGCACA CTGGCCAGGC TCGCGGCGCT CTACCATTGC CGCCCCGGCG ACCTGCTCGA CGGAACGGAT CACGACGACC TGGACGAGCT CCCCGGGCGG GTGCCGTCCG AGCGTGGCCC CCGCCGTGGT CTGAGCCGGT ATCGCCACCA GGATCAGGGC TCCTTCGCTC CCGCGGGCGA GGAGCGGGAG CCGCTGGCCG CGCCGACCGG CGGCTCTACC GAGCCGGCCG GTGCCCCGCG CCCCGCATCG CCGTGCGCCG CATCCCCGTC CCTCGGGTCC CCGTGCGCCG GCGAGTGTGC CGATCCCCAC TGCGGCGGGT GCCACGGGGG CGACGACGGG AACACCGACT GGGTGCGCGC GCCGGTCATG GTGATGATGC ATCAGGACGC CCCAGGGGCG CCCCTCGTCC CGAGCCGCGC GGCATGA
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Protein sequence | MPSTSKALRV EATRLRALGW TYQRIALELR LRHRLNARVA YRLAHGWTQE EVARRWNERW PGPGATKTGK TISYWEIWPA RGGRAPSART LARLAALYHC RPGDLLDGTD HDDLDELPGR VPSERGPRRG LSRYRHQDQG SFAPAGEERE PLAAPTGGST EPAGAPRPAS PCAASPSLGS PCAGECADPH CGGCHGGDDG NTDWVRAPVM VMMHQDAPGA PLVPSRAA
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