Gene Franean1_5975 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5975 
Symbol 
ID5674296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7280858 
End bp7281544 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content76% 
IMG OID641244823 
Producthypothetical protein 
Protein accessionYP_001510225 
Protein GI158317717 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.718615 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.151599 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAGCA CGTCGAAGGC GCTGCGGGTC GAGGCGACCC GGCTGCGCGC CCTGGGCTGG 
ACATACCAGC GCATCGCCCT GGAGCTGCGC CTCCGCCATC GCCTCAACGC GCGCGTCGCG
TACCGCCTGG CCCATGGCTG GACGCAGGAG GAGGTCGCTC GGCGCTGGAA CGAGCGCTGG
CCCGGGCCGG GCGCGACCAA GACGGGCAAG ACGATCTCGT ACTGGGAGAT CTGGCCGGCC
CGCGGCGGCC GAGCCCCCTC GGCGCGCACA CTGGCCAGGC TCGCGGCGCT CTACCATTGC
CGCCCCGGCG ACCTGCTCGA CGGAACGGAT CACGACGACC TGGACGAGCT CCCCGGGCGG
GTGCCGTCCG AGCGTGGCCC CCGCCGTGGT CTGAGCCGGT ATCGCCACCA GGATCAGGGC
TCCTTCGCTC CCGCGGGCGA GGAGCGGGAG CCGCTGGCCG CGCCGACCGG CGGCTCTACC
GAGCCGGCCG GTGCCCCGCG CCCCGCATCG CCGTGCGCCG CATCCCCGTC CCTCGGGTCC
CCGTGCGCCG GCGAGTGTGC CGATCCCCAC TGCGGCGGGT GCCACGGGGG CGACGACGGG
AACACCGACT GGGTGCGCGC GCCGGTCATG GTGATGATGC ATCAGGACGC CCCAGGGGCG
CCCCTCGTCC CGAGCCGCGC GGCATGA
 
Protein sequence
MPSTSKALRV EATRLRALGW TYQRIALELR LRHRLNARVA YRLAHGWTQE EVARRWNERW 
PGPGATKTGK TISYWEIWPA RGGRAPSART LARLAALYHC RPGDLLDGTD HDDLDELPGR
VPSERGPRRG LSRYRHQDQG SFAPAGEERE PLAAPTGGST EPAGAPRPAS PCAASPSLGS
PCAGECADPH CGGCHGGDDG NTDWVRAPVM VMMHQDAPGA PLVPSRAA