Gene Franean1_5960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5960 
Symbol 
ID5674281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7263070 
End bp7263576 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content67% 
IMG OID641244808 
Producthypothetical protein 
Protein accessionYP_001510210 
Protein GI158317702 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.464133 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.264326 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAACAGC AGCATCAGCG CCAGCGAAGG CCTGACCAGT GGTACGACGA CCCGGCCGGC 
ATCCTCGAAG CCCATCGACG GCAGGACGTC GCCGACGCCT ACGCCAGGTC GCGGCGCGAC
GGGAAGGTCA TCACGCCCGG TCGAATGATC GCCGAGCTGA CGTTCGGCTT CTGGCGCTAC
CTCCTGACCA GGCGATACGA GACAACCCTG TGGACTCCCG CACTTCGCCG CGCGTTTCCG
AACCTTCGCC CGGCACAACG GACCCGGATT TACAACCCCG TCGACAGCCT CGTTCGGCTC
CGCAATCGCG TCGCGCACCA CGAACCGATC CACAACCGAC CGCTTGCGAC CCTCCACCAT
GATCTGCTGC GTGTCGCCGG GCACCTCGAC GGCGGTGTCG AAGAGTGGAT CCGTGGCCGA
AGCCGAGTGC CCGCTCTCCT GCTGTCACGA CCACCGCAAC CGCGAGGAGG CGAAGGAGGC
TGTCCGGCAG TGGCGCCGGC TGCTTGA
 
Protein sequence
MEQQHQRQRR PDQWYDDPAG ILEAHRRQDV ADAYARSRRD GKVITPGRMI AELTFGFWRY 
LLTRRYETTL WTPALRRAFP NLRPAQRTRI YNPVDSLVRL RNRVAHHEPI HNRPLATLHH
DLLRVAGHLD GGVEEWIRGR SRVPALLLSR PPQPRGGEGG CPAVAPAA