Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_5924 |
Symbol | |
ID | 5674245 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 7195268 |
End bp | 7195552 |
Gene Length | 285 bp |
Protein Length | 94 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641244772 |
Product | transposase IS605 OrfB |
Protein accession | YP_001510174 |
Protein GI | 158317666 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0675] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.133993 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGAGCAGA AGGCCCCCGG GCGGGTTGAG AAGGTCCCCG CCGCGTACAC GAGTCAGCGT TGCTCTGCCT GCGGGCATGT GGCGTCCGGG AACCGCGAGA GCCAAGCGGT CTTCCGGTGC CTCGCCTGTG GGCACACGGC CAACGCCGAC GTCAACGCGG CGGTGAACAT CGCGGTTGGG AACATCGCGG CCGGACGGGC CGTGACCGCG CGGGGAGGCG CGGCGTTGGC CGGGCCCGCG AACCGCGAAC CTCAACACTG CGCACCCCTT CCGACGGGTG TGTAG
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Protein sequence | MEQKAPGRVE KVPAAYTSQR CSACGHVASG NRESQAVFRC LACGHTANAD VNAAVNIAVG NIAAGRAVTA RGGAALAGPA NREPQHCAPL PTGV
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