Gene Franean1_5924 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5924 
Symbol 
ID5674245 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7195268 
End bp7195552 
Gene Length285 bp 
Protein Length94 aa 
Translation table11 
GC content71% 
IMG OID641244772 
Producttransposase IS605 OrfB 
Protein accessionYP_001510174 
Protein GI158317666 
COG category[L] Replication, recombination and repair 
COG ID[COG0675] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.133993 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGAGCAGA AGGCCCCCGG GCGGGTTGAG AAGGTCCCCG CCGCGTACAC GAGTCAGCGT 
TGCTCTGCCT GCGGGCATGT GGCGTCCGGG AACCGCGAGA GCCAAGCGGT CTTCCGGTGC
CTCGCCTGTG GGCACACGGC CAACGCCGAC GTCAACGCGG CGGTGAACAT CGCGGTTGGG
AACATCGCGG CCGGACGGGC CGTGACCGCG CGGGGAGGCG CGGCGTTGGC CGGGCCCGCG
AACCGCGAAC CTCAACACTG CGCACCCCTT CCGACGGGTG TGTAG
 
Protein sequence
MEQKAPGRVE KVPAAYTSQR CSACGHVASG NRESQAVFRC LACGHTANAD VNAAVNIAVG 
NIAAGRAVTA RGGAALAGPA NREPQHCAPL PTGV