| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5918 |
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| Symbol | |
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| ID | 5674239 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 7189343 |
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| End bp | 7190542 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641244766 |
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| Product | IS605 family transposase OrfB |
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| Protein accession | YP_001510168 |
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| Protein GI | 158317660 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0675] Transposase and inactivated derivatives |
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| TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.320804 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGACGTT CCTTCAGGTT CCAGCTTCGC CCGACCGCCC GGCAGGCCGC GGCGCTGAGC
GTGATGCTCG GCGACCACCG GGCGCTGTAC AACGCCGCGT TGCAGGAACG CCGCGACGCC
TGGCGTCACC CGTCGAAGAC CACGATCCGC TACGGCGACC AGTCCGCCCA GTTGAAGGAG
ATCCGCGCCT GTGACCCGGA CCAGGGCCGC TGGTCGTTCT CCTCTCAGCA GGCCACCCTG
CGCCGGCTCG ACAAGGCGAT GGCCGCGTTC TTCCGCCGGG TCAGGGCGGG CGCGACGCCC
GGCTACCCGC GGTTCAAGGG CGCGGGCCGG TTCGACACGG TGGAGTGGCC GAAGGACGGT
GATGGTTGCC GCTGGGACTC CCAGCCCGGG CATCCCGCCC AGACCCGGGT CCGACTGCAG
GGCATCGGAC ATGTCAGGGT CAACCAGCAT CGGCCCGTGG CCGGCACGGT CAAGACGATC
AGCCTGAAGC GGGAAGGCCG CCGCTGGTAT GTGCTGTTGT CCTGCGACGA CGTGCCCGCT
GAGCCCTTCC CGGCCACCGG GGTGGTGGTC GGGGCGGACC TGGGTGTGGC GTCGCTGGTC
ACCCTCTCCG ACGGCCGCCA CGTCGGGAAC CCCCGCTACC TCGCGGCGGC GGCCGGCCGG
CTCGCGCGGG CGCAGCGGGA ACTGGCCCGC AAGAAGCGTG GGTCCACCCG GCGCCGGAAG
GCGGTCGCCA CGGTCGCGGC GCTGCACGGC ACGGTGCGCC GCCAGCGACT CGATCTCGCC
CACAAGGCGG CCCTCAGGCT GGTCCGTGAG CATGATCTGA TCGCCGTCGA GGCGCTGAAG
GTCACCAACA TGACCCGCAG GGCCGAACCG AAGCCCGACC CTGACCAGTC GGGGGCGTTC
CTCCCGAACG GTCAGGCCGC CAAATCCGGG CTGAACAAGT CGATCCTTGA CGCGGGATGG
GGGGTGTTCC TCGCCGTGCT GCGCGCCAAG GCTGAAAGTG CCGGACGGGT GGTCGTCGAG
GTCAACCCCG CCCACACCTC CCGCACCTGC GCGGCGTGCG GGCACTGCCA CGCCGACAAC
CGCAGAACAC AGGCCGCGTT CACCTGTGTC GCCTGCGGAC ACGCCGCGCA CGCCGACGTG
AACGCGGCGG TCAACATTCT TCGGGTCGGG CTGGCCCGTC AGGCCGCGGA AGCGGCCTGA
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| Protein sequence | MRRSFRFQLR PTARQAAALS VMLGDHRALY NAALQERRDA WRHPSKTTIR YGDQSAQLKE
IRACDPDQGR WSFSSQQATL RRLDKAMAAF FRRVRAGATP GYPRFKGAGR FDTVEWPKDG
DGCRWDSQPG HPAQTRVRLQ GIGHVRVNQH RPVAGTVKTI SLKREGRRWY VLLSCDDVPA
EPFPATGVVV GADLGVASLV TLSDGRHVGN PRYLAAAAGR LARAQRELAR KKRGSTRRRK
AVATVAALHG TVRRQRLDLA HKAALRLVRE HDLIAVEALK VTNMTRRAEP KPDPDQSGAF
LPNGQAAKSG LNKSILDAGW GVFLAVLRAK AESAGRVVVE VNPAHTSRTC AACGHCHADN
RRTQAAFTCV ACGHAAHADV NAAVNILRVG LARQAAEAA
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