Gene Franean1_5906 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5906 
Symbol 
ID5674227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7175630 
End bp7176208 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content72% 
IMG OID641244754 
Productcarbonic anhydrase 
Protein accessionYP_001510156 
Protein GI158317648 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0288] Carbonic anhydrase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.46464 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.626114 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGC CCGAAGAACT CGGACACGCC CAGGGCACGA CCGACATCCT GCTGGCACGT 
GCGGCGAGCT TCGCCGCACG GCGCCGCGCG GCGGGCGGCG GCTCGGCCCG GCCGGCCAGC
CCGGCCACCG GCGTGGCAAT CGTGGCCTGC ATGGACGCCC GCATCAACCT CGAGGCGATC
TTCGGCCTCG CGGAGGGCGA CGCGCACATC CTGCGCAACG CCGGCGGGGT GGTGACCGAG
GACATCGAGC GATCGCTGGC CGTCAGCCAG CACGCACTCG GGACCACCGA GATCATCCTG
ATCCACCACA CCAGGTGCGG CATGGAGACG CTCACCGACG ACGGCTTCCG CGCCTCACTG
GCCGAGCGGA CGGGTGTGCG TCCGACGTGG CGGCTCCAGT CGTTCACCAG CGCCGCGGAG
GACGTCTGGC GTTCGGTCAC GGCGCTGCGC TCGTCACCGT TCCTGCGCGC GTCGACCTCA
GTGCGCGGGT TCGTGTACGA CGTCGAGACC GGTGAGCTCG ATGAGATCAC CGAGAGCCCA
CAGCCGGCCG CGTGCGCGCC CACCCAGGCG ACCGCCTGA
 
Protein sequence
MSAPEELGHA QGTTDILLAR AASFAARRRA AGGGSARPAS PATGVAIVAC MDARINLEAI 
FGLAEGDAHI LRNAGGVVTE DIERSLAVSQ HALGTTEIIL IHHTRCGMET LTDDGFRASL
AERTGVRPTW RLQSFTSAAE DVWRSVTALR SSPFLRASTS VRGFVYDVET GELDEITESP
QPAACAPTQA TA