| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5869 |
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| Symbol | |
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| ID | 5674192 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 7122275 |
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| End bp | 7123855 |
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| Gene Length | 1581 bp |
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| Protein Length | 526 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641244719 |
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| Product | F420-0--gamma-glutamyl ligase |
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| Protein accession | YP_001510121 |
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| Protein GI | 158317613 |
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| COG category | [C] Energy production and conversion
[S] Function unknown |
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| COG ID | [COG0778] Nitroreductase
[COG1478] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR01916] F420-0:gamma-glutamyl ligase
[TIGR03553] F420 biosynthesis protein FbiB, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0435784 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.795016 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCTGACC TGTCCCCGGT GGGGACATCC ATGACGAAGG ACGGACCGGA ACCCGCGGAG
GCGTCGTTCC CGGGCGTCGC CGCACCCGAG GCGGAAGGTC CGCCCCCGGT CGGTGGCGAA
GCCCCGGCCG GGGAACCTCC CGCGGCGGAG GACGCGCTGC CGGCCGAGCA GTCCGAGAAG
TTCGAGAACT TCGAGAAGTC CGACGAGCAG GTCGGCACGG GCGCGGCGGA GCAGGTCGGC
GAGGAGCCGC TGGCGGAGCG GGAGCTGCGG ATTCTGCCGC TGGGCGGGAT CGGCGAGGTG
CGGCCGGGCG ACGACCTCGC CGCGCTGATC GCCGTGGCCG CGGCCACGGG CGCCGGGCCC
GGAGGCGGCC CCGGGCTGCG TGACGGTGAC GTCCTCGTCG TGACGTCCAA GATCGTGTCG
AAGGCCGAGG ACCGGCTGAT CCGGATCGAA GGCGACAGAG AGGCCACGCG CCAGGCCGCC
ATCGACGCCG AGTCCGTGCG TGAGGTCGCG CGCCGCGGCC CGACCCGCAT CGTCGAGACG
CACCACGGCC TCGTGCTGGC GAGCGCGGGG GTGGACGCGT CCAACATCGC GAAGGACTCG
ATCGCGCTGC TGCCGGTCGA CCCCGATACC AGTGCCCGCA CGCTGCGGGA CGGCCTGCGC
GACCGGCTCG GCGTCGACGT CGCGGTGATC ATCAGCGACA CGGCCGGGCG GCCCTGGCGG
CGCGGGCTGA CCGACATGGC GATCGGCGTC GCCGGGATGG CGGCGCTGCG CAGCCACATC
GGCGACGTCG ACTCCTACGG CAACGAGCTC GGGATGACCG AGATCGCCGA GGCCGACGAG
CTGGCCGGCG CGGCGGACCT GGTGAAGGGC AAACTCGGCG CCACGCCGGT GGCGATCGTC
CGCGGGTTCG CGCGCCGGCC CGACGACGGG AGCGGGTCAC GCGCGCTGCT GCGGCCCTGG
GACGAGGACA TGTTCCAGCT CGGCACGGTC GAGGCACGCC GCTCGGCCCC GTTCGCGCGG
CGCACGGTGC GGGAGTTCGC CGACCTCCCG GTCGACCCGG CGGCGGTGCA CCAGGCGATC
GCCGCGGCGA TCACCGCGCC CGCCCCGCAC CACACCACAC CATGGCGGTT CGTGCTGGTC
GAGGCGCGCC GGCACGCCCT GCTCGACGCG ATGGCGATGG CCTGGACGGA CGACCTGCGC
CGCGACGGGT TCGACGAGGA CTCGGTGAGC AGGCGGCTGC GCCGCGGCGA CGTGCTGCGC
CGGGCGCCGG TGCTGATCGT CCCGATGATG GTGACCGACG GCGCGCATCC CTACCCGGAC
GAGCGTCGGG TGCGGGCCGA GGAGCGGATG TTCACCGTGG CGCTCGGCGC CGCCGTGCAG
AACCTGCTGG TCGCCCTCGC GGCCGAGGGC CTGGGCTCGT GCTGGGTGTC GTCCGCGCTG
TTCTGCGGGG AGGTCGTGAC CGACACGCTG GACCTGCCGC GCACCTGGAC GCCGATGGGC
GTCGTGGGTG TGGGGCACCC GGCCGCACCG GCGCACCCGC GGCCGGCCCG TGACATCGCG
GCGTTCGTCG TGGAGCGCTG A
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| Protein sequence | MSDLSPVGTS MTKDGPEPAE ASFPGVAAPE AEGPPPVGGE APAGEPPAAE DALPAEQSEK
FENFEKSDEQ VGTGAAEQVG EEPLAERELR ILPLGGIGEV RPGDDLAALI AVAAATGAGP
GGGPGLRDGD VLVVTSKIVS KAEDRLIRIE GDREATRQAA IDAESVREVA RRGPTRIVET
HHGLVLASAG VDASNIAKDS IALLPVDPDT SARTLRDGLR DRLGVDVAVI ISDTAGRPWR
RGLTDMAIGV AGMAALRSHI GDVDSYGNEL GMTEIAEADE LAGAADLVKG KLGATPVAIV
RGFARRPDDG SGSRALLRPW DEDMFQLGTV EARRSAPFAR RTVREFADLP VDPAAVHQAI
AAAITAPAPH HTTPWRFVLV EARRHALLDA MAMAWTDDLR RDGFDEDSVS RRLRRGDVLR
RAPVLIVPMM VTDGAHPYPD ERRVRAEERM FTVALGAAVQ NLLVALAAEG LGSCWVSSAL
FCGEVVTDTL DLPRTWTPMG VVGVGHPAAP AHPRPARDIA AFVVER
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