| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5863 |
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| Symbol | |
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| ID | 5674186 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 7112784 |
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| End bp | 7115963 |
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| Gene Length | 3180 bp |
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| Protein Length | 1059 aa |
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| Translation table | 11 |
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| GC content | 79% |
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| IMG OID | 641244713 |
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| Product | hypothetical protein |
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| Protein accession | YP_001510115 |
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| Protein GI | 158317607 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1216] Predicted glycosyltransferases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0962596 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.213292 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAGAC CAACGCGGGA TGCCGACCAG CACCGGTGGG CGGTTCGTTC CCGAGGAGCC
GTTCGTCCCG GTCAGCGGGT CGTAGCGGTC GTCGTGACGC GGCGGGATCA GCCCGCGGCG
CCCGGCGGCC ACGACCCGCG ACGAAACGGT CTCGGCAGTA CTGGCACCGC TGCGGCGGTC
GCTGCGGGCC CGGTGGGTCC GGTGGTCGCG CTGACCGCGT CGACCCGCCC GCCCGAGCGG
ATCGTGGTCG TCCGTCTCGG CGGCCCCGCG ATCCCGGCGC AGCGAATCCC GGCGCAGTGG
GTTCCGGCGC AGTGGGTTCC GGCGGCAGAC AGCCCCACGC AGCCGAGCCC GGACCCTGAC
GTCCCGAGCC TTCCCGCCCG AGACGTCCCG GGCCTGCCCG CTGGGGACGT CCTGAGCCTG
CCTGCCGGGA CGTCCTTCGG TGTCGCGGTC GCGGCCGGTA TCCGGCACGG CGGGCTGGGC
GGCGCGCCCG ACACCTTCTA CTGGCTGATC CACGACGGCG TCCTGCCACG GCCCGACGCC
CTGGAACGAC TGCTCACCTA CGCCCGCGTC GACCCGGGCG CGGCGGTCCT CGGTCCCAAG
GTGCTCGACG CCGCCCGACC GGAATTCCTG CTCGAGGCGG GTGTGACGGT CGACCGGGCC
GGCCGGCGGA TCACCGGTGT CGTCCCGGGC GTGCCCGACC ACGGCCAGCA TGACGCCGTG
CGGGACGTGC TGGCCGTCTC CTGCACGGGG ATGCTCGTGC GAGCCTCGGC ATGGGAGCGG
CTCGGCGGCC TGGCAGCGGA CATGACCGCC GGCCTCGATC TGGATCTCGG CGCCCGCGCG
GCGCGGGCGG GCCTGCGGGT CGTCGTCGTG CCCCCGGCGG CGGTGCTGCT CGCGCCGCCC
GCACGTACCG ACGCGCCCCT CGCTGACAGG CCCCTCGCGT CCGCCGCGTC CCGCGCGGGC
GACCGTGTCG GGAGGGTCGC GGGAGCGCGG GTGCGACTCG CGCTGACGGC GGCGCCCTTC
CTCGTACCGG CCGTGCTCGC GTTGGTGGTC GCGGGCGCGG CGCGGGCCGG TGCCCGCCTG
CTCCTCCCGC CCCGGGACAG CGGTGATCTG AGCGGCCCGC GTTCCCGCGG CCGGTGGCGC
GACGCGTTGA CCGAGCTGTG GATCGCCGGT GCCGTCCTCG CCGGCCCGCG GCCCCTGTTC
CGGATGCGCG TGCGGTTCGG CCGGTGCGTG ACGGTGCCGC GGCGCGCCGT GCGCGAGCTG
CTGTCGGCCC GACCCCGTGC GGTCGCCGAC CGGGCGCCGA GTGGCCCCCG CGCGGCCGCC
CCGCCGCGGG CGCTCGCGGT GGTGATGGCC CTGTTCCTGG GGGCGGCTGG CCTGGCCGTC
CGCCGGTTGC CACCGGACGC CGTCGGCGGT GGCGTGCCGA TGCCCGAGTA CGCCGGTGAC
CTGTGGTCCG TGGTGTGGTC CGGTTGGCAG GGCTCCGCGG GCGGCGTGCT CGGCTGGCCG
GGCTCCGCAC CGCCCTGGAC GGCTCTGCTC GCCGCGCTGT CGTCCGTCGC CGCCCCGGTC
GGTCTCAGCG TGGCCGCGAC CTGCTCGGTC GTGCTCGTCG TCGCTCCGGC CGCGGCGACC
TACCTCGCGT ACCGGGCCTC GGGACGGCTC GTCGGCTCGC GCGGCCCGAG GCTCGGCCTG
GCGGCCCTGT ACGGCGTGTC CCCGCCGGTC ACGGGATCAG TGCTGGCCGG CCGGATCGAG
ACCGCCGTCG CCCTGGCGGT GCTGCCCGCC GTTCTCGCGG CGGGGGACGA GTTCCTCCGT
GGCCGGACGG TCCGGGCCGG AGCGAGCGGT TCCGGTTCCG GAACCGGCCT CGACGCCGAC
GCCGGTGGGC GCGGGCGCGC GGGCTGGCGG CTCGCCGTCT CCCTGGCCCT CGTCGTCGCG
TGCATGCCGG TGCTGGCACC GATCGCGCTG GTCGGCCTGC CCACGGCGGC CTGGGCCGTC
CGGAGATCAC GGCCGCCGGG CACGCAACCG CCGCCGGTCG GGCCGGTGCC GGTACTTGGT
GTGCTGATCG CGGGAGCCGT CCCCCTGCTG CCCGGCCTCG TCACGGGGGG CGTCGGGTGG
TGGCCCGCCG CTGTGTCGCC CCTGTCGGGC TCGGAGCTGA CCGGCCTGGT GGCCGGCGCT
CCCGGTGACG AGAGGCGGGC CGCGGCGCTC TGCCTCTTCG TGGCGCTGTG CCTCTTCGCG
GCGCTGTGCC TGCTGCTCAC CGCCTGCCCC CGCCTGCTCG GCCGTCGGGC GTCCTCCGGG
GTCGGTGGTG TGGCCACCGG CTGGGCGCCG GCCACGGCGC GGGTCGGGGC GGTCCTGCTC
GGCGGATGTG TGCTGGCGTT CGCCGCCGGC CTGGCCACCG CGACGCCGAT TCCGGGTCCC
GCGCAGGAGG AGAGCCCGGC CCGCGCGGTC GCCGCGCTGA GCCGGACGGG CGGACCAGGC
GCGCGCGTCC TGGTGCTGCG CCGGTCCGGC CCGTCGGGGC CGGTCGCGTA CAGCCTGGCC
GCCCAGGGCG GGCCGAGGTT CCCCGCCGCC GCCCCGCACC GGCCGCCCTC CGCTGCCGAC
CGGGCGCTCG CGACGCTCGT GGCGGACATC TCCGCCGGTC TCCCGGACGC CGCCGACGCG
CTGCCGGCGT TCGGTGTGGC CGCGGTCGTC GTCCCGGCGG GTTCGGCCGA CCCGGCGCTG
GTGGCCGCAC TCGACGCGGT GGACGGCCTC TCCCGGGAGA GGCGCGGCCC TGACGTGCTG
CTGTGGCGCC CGGTCGCCGC CGCCCCCGGT GCCGGGGAAG GCACGACCCT GCTCCGGCTC
GGCTCGCCCG GTCCGGCCGG ATCGACCCGG CTGCCCGGCG GCGCCGCGGG GCGCCGGGTG
GTGCTCGCCG AACCCGCCGA TTCCGGCTGG CGGGCGACCC TGGACGGCGC GCCGCTGCCC
GCGGCGGTCG CGGACGGCTG GGCGCAGGCG TTCGTCCTGC CGGCCGAGGG CGGCCTGCTC
GAGGTCTCCT ACGATCACCA CCGCCACCGC GCCGCCGTGC TGGCGACCGC CGCAGCCGGG
GCGCTCCTGC TGGCCGCGGG CCCCTTGGCC GCCGTCCCGC GCCGGCGCAG TGGCCGCCGC
GCGGCGGCCA CGCGGGCGGC GGCCACGCGG GCGGCGGCCA CGCGGGCGGA GACCACGTGA
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| Protein sequence | MTRPTRDADQ HRWAVRSRGA VRPGQRVVAV VVTRRDQPAA PGGHDPRRNG LGSTGTAAAV
AAGPVGPVVA LTASTRPPER IVVVRLGGPA IPAQRIPAQW VPAQWVPAAD SPTQPSPDPD
VPSLPARDVP GLPAGDVLSL PAGTSFGVAV AAGIRHGGLG GAPDTFYWLI HDGVLPRPDA
LERLLTYARV DPGAAVLGPK VLDAARPEFL LEAGVTVDRA GRRITGVVPG VPDHGQHDAV
RDVLAVSCTG MLVRASAWER LGGLAADMTA GLDLDLGARA ARAGLRVVVV PPAAVLLAPP
ARTDAPLADR PLASAASRAG DRVGRVAGAR VRLALTAAPF LVPAVLALVV AGAARAGARL
LLPPRDSGDL SGPRSRGRWR DALTELWIAG AVLAGPRPLF RMRVRFGRCV TVPRRAVREL
LSARPRAVAD RAPSGPRAAA PPRALAVVMA LFLGAAGLAV RRLPPDAVGG GVPMPEYAGD
LWSVVWSGWQ GSAGGVLGWP GSAPPWTALL AALSSVAAPV GLSVAATCSV VLVVAPAAAT
YLAYRASGRL VGSRGPRLGL AALYGVSPPV TGSVLAGRIE TAVALAVLPA VLAAGDEFLR
GRTVRAGASG SGSGTGLDAD AGGRGRAGWR LAVSLALVVA CMPVLAPIAL VGLPTAAWAV
RRSRPPGTQP PPVGPVPVLG VLIAGAVPLL PGLVTGGVGW WPAAVSPLSG SELTGLVAGA
PGDERRAAAL CLFVALCLFA ALCLLLTACP RLLGRRASSG VGGVATGWAP ATARVGAVLL
GGCVLAFAAG LATATPIPGP AQEESPARAV AALSRTGGPG ARVLVLRRSG PSGPVAYSLA
AQGGPRFPAA APHRPPSAAD RALATLVADI SAGLPDAADA LPAFGVAAVV VPAGSADPAL
VAALDAVDGL SRERRGPDVL LWRPVAAAPG AGEGTTLLRL GSPGPAGSTR LPGGAAGRRV
VLAEPADSGW RATLDGAPLP AAVADGWAQA FVLPAEGGLL EVSYDHHRHR AAVLATAAAG
ALLLAAGPLA AVPRRRSGRR AAATRAAATR AAATRAETT
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