| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5856 |
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| Symbol | |
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| ID | 5674179 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 7105644 |
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| End bp | 7106816 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 641244706 |
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| Product | RpiR family transcriptional regulator |
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| Protein accession | YP_001510108 |
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| Protein GI | 158317600 |
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| COG category | [K] Transcription |
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| COG ID | [COG1737] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.161411 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACGTCG ACGAGCCCAT CCTGGACGAC GCGCGCAGGC TCGAGGCCGC GGACACGCTC
AACCTGCTCC CGAACACGGC CTCGGCGGCG CGCCAGGTCC GGGAGAGCTG GCGCCTGGCG
CAGGAGGCCG GTGTCGGGTC GCTCGCGGCC GACGGCCGGC CCCGCGCGGT CGTGGTCGTC
GGGGTGGGCG CCTCGGCGCT CGCCGGGGAC GTGCTCGACG CCGTCGCCGG GCAGGCCGCA
CCGGTGCCGG TGATCGCGCA CCATCGGCAC GGGCTGCCCG GTTGGGCCGG AGTGGCTGAC
GTGGTCCTCG CCGTGTCCGT GTCCGGTACC TCCGCGGAAA CCCTCTCGGC CGTCGAGGAG
GCGCACCGGC GGGGCTGCCG GCTGGCCGTC GTCGGCCCCG CGGACTCTCC GTTGTCCCAC
CTCGCGGAGC TGGCCAGGGC GCCGTTCGTG GCGCTGCCCG ACGCCCGGCC GGCGCACACC
GGCCTGTGGT CGCTGGCCGT CCCGGTGCTC GCCGCCGCGG CGGCGCTCGG GGTGCACCGC
GAGGGCGAGG CCGCGATCGA GGCCGCCGCG GTGCGCCTGG AGGCGATGGC CACCAGGTGC
CGGCCGACGA GCGAGTCGTT CGTCAACCCG GCGAAGACGC TGGCCCTCGA GCTGGCCGGC
GCTCTGCCGC TGTGGTGGGG CACGACCCGG CTGAGTGAGG TCGCCGCGAT CCGGGCCGCC
GGTGTGCTTG CGGCGAACGC GGGCTACCCC GCGCTGGTCG GAGCGCTGCC GCATCCGGCC
GAGGACCAGG TTGCGCTGTT CCGCGGTGCC TTCGGTTCCG GCAGCGGCGG GGCCGCCTCG
GACGGTGGCG AAGGCACCGG CGCCGACGAC GAGTTCGCCG ACTTCTTCCG CGACCGGGTC
GACGACGAGG CTGTCGTACG GCTTCGGCTG ATCCTGCTGC GTGATCCCGC CGGCGAGCAT
CCCGAGGTCG CCCGTGCGGC GGAGCGGGCC GTCATGCTGG CGGGTGAGCA CGGCGTCGGC
GTCACCGAGC TGCGGGCGGA GGGCATGGCG CCGCTGGAGC GCCTGGCCTC CCTGATCGGC
CTGATCGACT TCGCGGGCAG CTACGTCGGA CTCGTACTCG GGGTCGACCC CGGCGCCGCG
CTGCGGCTGC GGGAGATCGG CACCGCCCGC TGA
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| Protein sequence | MNVDEPILDD ARRLEAADTL NLLPNTASAA RQVRESWRLA QEAGVGSLAA DGRPRAVVVV
GVGASALAGD VLDAVAGQAA PVPVIAHHRH GLPGWAGVAD VVLAVSVSGT SAETLSAVEE
AHRRGCRLAV VGPADSPLSH LAELARAPFV ALPDARPAHT GLWSLAVPVL AAAAALGVHR
EGEAAIEAAA VRLEAMATRC RPTSESFVNP AKTLALELAG ALPLWWGTTR LSEVAAIRAA
GVLAANAGYP ALVGALPHPA EDQVALFRGA FGSGSGGAAS DGGEGTGADD EFADFFRDRV
DDEAVVRLRL ILLRDPAGEH PEVARAAERA VMLAGEHGVG VTELRAEGMA PLERLASLIG
LIDFAGSYVG LVLGVDPGAA LRLREIGTAR
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