| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5853 |
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| Symbol | |
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| ID | 5674176 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 7100804 |
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| End bp | 7103263 |
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| Gene Length | 2460 bp |
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| Protein Length | 819 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641244703 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_001510105 |
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| Protein GI | 158317597 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.698953 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.762762 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGGCC GGCCGCGGGG TGGTGTCACC CACCCGGACG AGACAGGTGG TCCCGCCGGG
CGGTCCCGCG GTGGGCCGAA CGGGCCCGGG CGGCTCGGGC GGTCGGTGCC GCGTCCCCCG
GGGAGCCGTT CACGCGGCAC GTCGGCGCCG CTCGGCAGCG CCGACGACCT GCCGTTCGGG
CCGCCGACGG GCGGAATTCG CCGCCCAGTC GACCGGCGGC GGCACCTCAC CCGGGCGGGG
CTCATCGCGA CCGCCATGGG CGTCGCGGTC GGCCTCATGG CGTTGCCGTT CCTGAGCGCC
GCGGGGCTGT TCGCGAAGGC GTCCGCCGAC CACTTCCTGG AACTTCCGGC GGACCTCGTC
ATCCCGCCGC CGCCACAGAG CTCCAAGATC CTCGCGGCGG ACGGATCCGT GATCGCCACG
CTCACCGGTA CAGAGAACCG GGAGGTCGTC ACCGGCGACC AGATCCCGAA GATCATGCGG
GAGGCGATCG TCTCGATCGA GGACGCCCGC TTCTACTCTC ACAACGGTGT CGACCCCCAG
GGGGTGTTGC GGGCCGCGGC CCGCAACAGC GAGGCCGGCT CCACCACCCA GGGCGGCTCC
ACACTGACCC AGCAGTACGT GAAGAACGTG CTGCTGCAGG ACGCCACCAC TCCCGAGGAG
CGCGACGCGG TCGCCGGCGA CTCGCTGGAC CGCAAGCTGC GCGAGCTCCG CTACGCGATC
GCGATCGAGC AGCGGTTCAG CAAGGACGAG ATCCTCACCC GGTACCTGAA CATCGCCTAC
TTCGGCGACG GCGCGTACGG CGTGGGGACG GCGGCCGAGC ACTACTTCGG CATTCCCATC
TCCGAGGTCA GCCTCGAGCA GGCCGCCCTG CTCGCCGGGC TCGTCCAGAG CCCGTCGCGC
TACGACCCGG TGAACCACCC GGAGGCCGCA CTCGAGCGCA GGAACATGGT GCTCACCCGG
ATGGCCGACG AGCACTACGT CAGCCGCACC CAGGCGGACG CCGCCAGGCA GATGCCGATC
GACGTCATCC GCGACCAGCC GACCACGCAG GACTCCTGTG AGATCTCGGT GGCGCCGTTC
TTCTGCGACT ACATCCGCAC CCGGCTGCGC GCCAACCCGG CGCTGGGCGC CACCGCCGAG
GAGCGTGACC GGCGCATCCA CGAGGGTGGC CTGGTCATCA AGACCACGCT GAACCCGCAG
GTGCAGCAGG CGGCGCAGAT GGCGGTCAAC TCGACCATCC CGCCGGACAA CCGGGTGTCC
GCGACCGAGG TCGTCATCCA GCCGGGCACC GGCGCGATCC TCGGGATGGC GGTCAACCGC
GTCTACGGGA CCAACGAGGC GGCGAACCAG ACGAAGGTCT CGCTGCCGAT GGAGCCCACG
TTCCAGCCCG GGTCGACCTT CAAGACGTTC ACCGTGGCGG CCGCACTCGA GCAGGGGTAC
GGCGTGGGGA CGGCGTGGTA CTCCCCCGCC TGCTACTCGA CCGACGCTTT CCCGCTCGAC
CGCGGCGAGG GGGACTGCCC CAAGGGCTAC CAGAACGCCG ACCCGGCCGA AGCCGGCATC
TACCGGATGG ACGACGCGAC CTGGGATTCG GTCAACACCT ACTTCATCCA GCTCGAGGAG
GAGGTCGGGG TGCCGGCGGT CGTCGAGATG GCGACCAGGC TCGGCGTCTC CCCCGACCAC
CTCAAGGACA TCCCGCCGAC CAAGGGCGAC GTCACCATCG GCGGTGAGTA CGTCAGCCCG
ATGGACATGG CGGTCGCCTA CTCCACGCTG GCGGCCGGCG GCGTCCGGTG CGAGCCGCGC
TTCGCCACCT CGGTGGTCGA CGCCGGTGGC CAGCAGATCG ACGTGGGCAA CACGCCGAAG
TGCGAGCGGG TGCTGTCCCA GGGCGTCGCG GACACCACGA CGAGCATCCT GGCCGGGGTG
CTCACCAAGG GCACCGGCGG GAACGCCCGG TTCGACCACC CCGCGGCGGG CAAGACCGGC
ACCAACGACG GCTTCTCCAG CGCCTGGTTC GTCGGCTACA CCCCGCAGAT CGCGGCGGCG
GTGGCCGTTG GCGACCCGCA CGGCGCGGTC GCGCACCCGC TGCGCAACGT CGTCGCGGCC
GGCCGCACCT GGCCGCACGT GTTCGGCGGC GACCTGCCGG CGATCATCTG GGGCAGTTCG
ATGCGGGGCG CGCTGGCCGG GCAGCCCGTG CAGCCGCTGC CCGGCGCGGA CCGCGACGTG
GCCCGGGGAA CCAGGGGCGG CCGACTCATG AACACCCCAC CACCGGCACC CACCCCGACG
CTGCCGAGCC TGGAAGATCT GCTGCCAGGC GCGGGCACCG GCCAGACCCC GGGGTTCGGG
CAGGGCGGCG GTGGCGGTGG TCAGGGCCCG GGGCAGGTCG TCGTGCCGCA GACCAACCAG
GGCACCGGCC AGGGGCAACA ACAGCAGGGC CAACCCGGCC GCAACAACCA GGGCCGCTAG
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| Protein sequence | MAGRPRGGVT HPDETGGPAG RSRGGPNGPG RLGRSVPRPP GSRSRGTSAP LGSADDLPFG
PPTGGIRRPV DRRRHLTRAG LIATAMGVAV GLMALPFLSA AGLFAKASAD HFLELPADLV
IPPPPQSSKI LAADGSVIAT LTGTENREVV TGDQIPKIMR EAIVSIEDAR FYSHNGVDPQ
GVLRAAARNS EAGSTTQGGS TLTQQYVKNV LLQDATTPEE RDAVAGDSLD RKLRELRYAI
AIEQRFSKDE ILTRYLNIAY FGDGAYGVGT AAEHYFGIPI SEVSLEQAAL LAGLVQSPSR
YDPVNHPEAA LERRNMVLTR MADEHYVSRT QADAARQMPI DVIRDQPTTQ DSCEISVAPF
FCDYIRTRLR ANPALGATAE ERDRRIHEGG LVIKTTLNPQ VQQAAQMAVN STIPPDNRVS
ATEVVIQPGT GAILGMAVNR VYGTNEAANQ TKVSLPMEPT FQPGSTFKTF TVAAALEQGY
GVGTAWYSPA CYSTDAFPLD RGEGDCPKGY QNADPAEAGI YRMDDATWDS VNTYFIQLEE
EVGVPAVVEM ATRLGVSPDH LKDIPPTKGD VTIGGEYVSP MDMAVAYSTL AAGGVRCEPR
FATSVVDAGG QQIDVGNTPK CERVLSQGVA DTTTSILAGV LTKGTGGNAR FDHPAAGKTG
TNDGFSSAWF VGYTPQIAAA VAVGDPHGAV AHPLRNVVAA GRTWPHVFGG DLPAIIWGSS
MRGALAGQPV QPLPGADRDV ARGTRGGRLM NTPPPAPTPT LPSLEDLLPG AGTGQTPGFG
QGGGGGGQGP GQVVVPQTNQ GTGQGQQQQG QPGRNNQGR
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